Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0153 |
Symbol | |
ID | 5329588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 170520 |
End bp | 171452 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640792674 |
Product | ribonuclease Z |
Protein accession | YP_001329374 |
Protein GI | 150402080 |
COG category | [R] General function prediction only |
COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
TIGRFAM ID | [TIGR02651] ribonuclease Z |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.585164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.015686 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTAA CTTTTCTTGG AACCGGAGCG GCAATACCCA CCAAATATAG GGCCCATCCA TCAATTTCCT TAAAATTTGA TGGAGAGATA TTCTTGTTTG ATTGTGGTGA AAATACACAA AGACAGATTA TTTTTACAGA TGTATCTCCG ATGAAAATTA ATAATATCTT TATTTCACAC TTGCACGGCG ACCATATCTT AGGAATCCCC GGACTTATGC AATCAATTGC ATTTCAGGGC AGAACAAAGC CATTGAACAT ATACGGGCCA AAAGAAACTG CAAAAATGAT TGAAAATATA TTAAATGTGG GCTACCATTC AATCGATTAC CCAATAAATG TCTATGAAAT ATCTGCAAAG TCCCCTGAAA AGATAATTTC AAGTGATAAT TACGAAGTAT TCAGTTTTCC AGTAGTTCAC TCCGTTCCTG CACTTGCATA TGTATTCAAA CAGGTTAAAA AACCTAGAAT GGATTTGGAA AAAGTAAATA AATTGGGAAT TGAGATCGGG CCTGATTTAA AAAGGTTAAA AGATGGTTTT AATATTGAAC TCAACGGAAA AATAATAACT CCAGATGACG TTACAGTTCC CCCAAAAAAA GGGATTTGCG TAGGATACAG TGGGGATACT ATTCCCTTGA ATGAATTTGC TGAATTTTTA AAAGAATTAA AATGCACGAC GTTAATTCAT GAAGCAACTT TTGATAAATC AATGGATAAA AATGCAAAAG AAACATTACA TTCGACCGTT AGTGACGCAT TAAACATTGC AAAACTTTCT GGCGTGAATA CTGTAATATT AACACATATA TCGGCAAGAT ATGACGAAAT ATCTGCTTAT GAAAAAGACA TTGTTGAATT TAAAGCAGAA CATCCGGATT TACACATACT GATTGCAGAA GATTTAATGG AATATTCATT AAAAGGAAAA TAG
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Protein sequence | MKLTFLGTGA AIPTKYRAHP SISLKFDGEI FLFDCGENTQ RQIIFTDVSP MKINNIFISH LHGDHILGIP GLMQSIAFQG RTKPLNIYGP KETAKMIENI LNVGYHSIDY PINVYEISAK SPEKIISSDN YEVFSFPVVH SVPALAYVFK QVKKPRMDLE KVNKLGIEIG PDLKRLKDGF NIELNGKIIT PDDVTVPPKK GICVGYSGDT IPLNEFAEFL KELKCTTLIH EATFDKSMDK NAKETLHSTV SDALNIAKLS GVNTVILTHI SARYDEISAY EKDIVEFKAE HPDLHILIAE DLMEYSLKGK
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