| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0137 |
|---|
| Symbol | |
|---|
| ID | 5328049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 154841 |
|---|
| End bp | 155479 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640792658 |
|---|
| Product | cobalt transport protein CbiM |
|---|
| Protein accession | YP_001329358 |
|---|
| Protein GI | 150402064 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0440058 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACATAC CAGATGGATT TATCCCATTT TGGGAAAGCG CGATATTTTG GGTAATTTCC
CTGATATTTT TAAGCTTGTC CTTAAGATGG GCATCAAAAG AAATGAATGA AAAGACAGTT
CCATTATTTA CGGCACTTGC AGCAGGTATC TTTGCAATTC AGGCAATGAA CATGCCAATA
CCTTGGGGAA CCAGTGGACA CATGGTTGGT GCAGCATTGA CTGCAATAGT GTTTGATAGC
CCTTGGGCTG CTGTATTACT GTTGGCTATG GTTTTAATTG TTCAAGGATT ATTCTTTGCA
GACGGTGGTT TAATCGTCAT GGGTACAAAC ATCTTTAACA TGGGTATTGT TGGCGGATTT
GCAGGATACT ACATCTTCAA AGCATTGAAA AAGACGAACT TCCACGTTGC GATATTTATT
GCCGCATGGG CTGCAACATT TATAGCTTCA TTAGTTTGTG CAGCAGAACT TGCAATTGCA
GGAACATTCC CTATAGACCT TGGAATTCAA TTTATGGGTC TTTACCACGC AGTAATCGGA
ATTATTGAAG GATTAATCAC TGTAATTGTG GTAGGCTACC TCGCATCAGC TCGACCGGAT
CTTGTAAAGA GCGTAAAAAA GGTGGTTTTA AATGAATAA
|
|---|
| Protein sequence | MHIPDGFIPF WESAIFWVIS LIFLSLSLRW ASKEMNEKTV PLFTALAAGI FAIQAMNMPI
PWGTSGHMVG AALTAIVFDS PWAAVLLLAM VLIVQGLFFA DGGLIVMGTN IFNMGIVGGF
AGYYIFKALK KTNFHVAIFI AAWAATFIAS LVCAAELAIA GTFPIDLGIQ FMGLYHAVIG
IIEGLITVIV VGYLASARPD LVKSVKKVVL NE
|
|---|
| |