Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0094 |
Symbol | |
ID | 5328362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | + |
Start bp | 110771 |
End bp | 112024 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640792615 |
Product | amino acid permease-associated region |
Protein accession | YP_001329315 |
Protein GI | 150402021 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.699923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000401334 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGTTCTA AAAAATTAGG GCCCTGCACC CTCAGCGGAC TTATTGTGGG GCCAATACTT GGATCAGGAA TTGTTATAAT ACCGCCAATA GTTTACGATA TTTTAAAAGA TTATTCCATA TTTGCATGGG TAATCATGAT GGTCATTGGT GGAATTTTTG CATATTTTGC AAGTAAATTA TGTTTAAAAT TTCCAGGGGA TTCTGGATTA ACTGAGGTAG TTGGTCATTC TTTTGGAAAA TCCTATAAGG ATCTAAATGC TTATTATCTG CTTATTGCGT TAGCAATGGG GCCATTAGTT GTGATAATGG TTGCAGGTGA ATATCTTTCA GTATTATTTT CAAATTTCAT GTTTGGAGCA GAGTTTTATT CAGCAATTTT AATGATAATT GGCGGAATAA TCCTTTCAAG AAATATTTCT TCGGTAGGTA AAATTTCAAT GATTATTTCC TCAGTAATTT CCACAATACT GGTAGTTGGC GGACTTTTTA CAATTTTATT TTACAGAAAA GAAGTTTTGT TTACCGAAAC TGCGATAAAT ACAATCGATA TAGGATATTC GTTTTTGATA ATGTTTTGGT CAATTATTGG CTGGGAAATT CTTGGAAATT ACAGTTTGGA AGTTGAAAAT CCCAAAAAAA CAATTCCAAC GGCAGCACTT TTAAGTGTAA TTGCAATGTC TGTAGTTTAT TTAATAGTTT CAGGGGCCCT TCAGGTATTG GATGTAGAAA AATTAGGACC CATAAATCCA ATTTCAGGAC TTTCATTAAT ATTGTACCCG TTATTTGGGG ATTATTCAAG CATTATATTA TCAATTACGA TAACAGGGCT TTGTTTATGT AGTTTTCTAA TGTTAATTGG CGGTGCATCA AGATTAGTTT ATGCACAGGC TCGGGCAGAA GTATTTCCAA AAATTTTTAA ATACCGGTCA AAAACAAATG CTCCTCTTTC AGGAATATTA TTAATGGTTT TTACAAACTT TTTGACATTA TTTGCAGTAT ATTTAGATTT AATTTCGCTT ACGGGAATAA TTGCGGCAGT AAATGCATTT TTAATTAGTA ATATAATCAT GGCTGCAATT GCATCGATAA AAGTTTTTGA TAATTTACTT GAAAAGGGAT TTGCAATATT TTTGGCGGTT TCATTCCTGT CAATGTTTTT ATTTTCTTCA AAAATAGTAA TAATAATTAT TTTGGTAATG TTTTTTGGAA CTATTGCAAA TAATTTAAAA AAGAGTAATT TTAAACTGAA ATAG
|
Protein sequence | MSSKKLGPCT LSGLIVGPIL GSGIVIIPPI VYDILKDYSI FAWVIMMVIG GIFAYFASKL CLKFPGDSGL TEVVGHSFGK SYKDLNAYYL LIALAMGPLV VIMVAGEYLS VLFSNFMFGA EFYSAILMII GGIILSRNIS SVGKISMIIS SVISTILVVG GLFTILFYRK EVLFTETAIN TIDIGYSFLI MFWSIIGWEI LGNYSLEVEN PKKTIPTAAL LSVIAMSVVY LIVSGALQVL DVEKLGPINP ISGLSLILYP LFGDYSSIIL SITITGLCLC SFLMLIGGAS RLVYAQARAE VFPKIFKYRS KTNAPLSGIL LMVFTNFLTL FAVYLDLISL TGIIAAVNAF LISNIIMAAI ASIKVFDNLL EKGFAIFLAV SFLSMFLFSS KIVIIIILVM FFGTIANNLK KSNFKLK
|
| |