| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0046 |
|---|
| Symbol | |
|---|
| ID | 5329130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 52433 |
|---|
| End bp | 54322 |
|---|
| Gene Length | 1890 bp |
|---|
| Protein Length | 629 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 640792567 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001329268 |
|---|
| Protein GI | 150401974 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00660525 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0121603 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGTAATA AAAACAAACG ATTATATTAT AAAAAAACCT TAAATTGTTC ACTAAATGAA
ATAAATACGA GGGGATTAAT TATTTCAAAA TTAAAATTAC CATACTTAAT GCTAATTCTT
TACATCTGTT TGGGATTATT TTTACAATAT ATCGAAGTTT CTGAGATCCA GTCTTTTTTT
GGGCCATTAA ATGGAGATCA GTACTATCAA ATGGGTTCGG TAAACCATAT ATTATCGGGT
GGAAATCCAT TTGAAAGTTC TTCAATGGTA GGGGGACTTC CGGGATATTT AGCACTTTAC
GGGATACTAT GTGCAGGGTT TTGTAAATTA TGTAGTTTAG ATGCATTTAA TGGAATGATT
TATTTTTCTT TGACAATATT TGCATTTGGA AGCTTTATAT GGTATTACAC ATTTAAAAGG
ATCTTTAAAG ACGAATGGAC TTCAGTAATA GGCGTTGTTT TAACAAATGG AATCTCAATG
TATCCAATAC TAAAATATAC TGAGTTTACC ATTCAAATTA TGATTCCGTT ATTCATACTG
GCCATTTATT TAGTATTCAC ATCCAAAAAA TCATTCAATT ATGCATTTTT AGGATTAATC
TATGGATTAC TTGCAATATC CCACAATATA GCGTTTGTTG GTGCCACATT AATTATTGCA
ACATTTTTAA TCTATGAAAT ATGTAAAAAA TATAGTTCGG ATAAAATAAA TGGTCTTAGA
GAATATTTTA AGGAAAATTT GAAAAATTTT GGAGTATTTT TTATATTTGG GCTACCCATA
TCCATACTCT ACTGGTACAG ACCATTATTT GTTTATAAAT TACATCAAGT AAATAATTTT
ATGATTTGGG GTGTTAGCCT AAACTGGTAT AACTCCGATG TCCAAATTGA GTTTATATTT
GATGTATTAA GGAGTTTGAT TAATGTTGAT TCGTTATATT CTGCTCTGGT TTCAGTATTC
CTTATTAATG GTTTAGTTCA GATGTATAAA ACCAGAACGA ATAGTCAATG CAAATTTTTA
AAAATTTTTG GAATAGGCTG TATTTTTGCA ACTTTTTCAT ATTTTATTAC TATTCCATTA
TTAAACATGC ATTTTTTTCC AAATTATATG TCGAAATTCT ATCTGGTTAC ATTATGTTCC
ATGATATGCA TTTATGGGTT AAATAGTTTA AAAAATACCA AAATAATTAA GAATCACCAT
TTAAGAATGA ACTTAGGGTT TACGTCACTA TTTATTTTAC TTATGGTCCT TACATCCAAT
ATTTTTGTAT CAAATATGGA TGATTGGTCA GTTGCAGGGA AAAATCCATT CCCAAATTCC
CAAATATCAT TATATAATTA TCTTTTAGAA AATACATCTT CAGAAGATAC AATTTTGTCT
ACAAAAGGAT TAAGTTATTT TATAATTGGA ACTAGTGGTA GAAAGTTGCT TGTAAATCAT
TGGGCACAAC AGAACGATCC ATACTTAGAT TTATCAGAAC GGGATATCGA TGCTGCAATT
ATTCTTTATG GAAATAATAC TGAAAAAAAA TTGGAATTAA TTGAAAAATA TAATGTAAAA
TATATTTATT GGGATTATCG TTGGAATAGC ACGGAATATC AGTTCGTAAA CGGGTCAGAA
ACACCAAAAG ATCCATTAAT CGCATTTTAC AAGGAAAAAT ACAAAAAACA GCTTGAAGAA
TACGGCATAA AATATACTGA AAAAACCTGG TGGGTGGATA TATATCAAAG AAACGCTCAG
ACTTTAGACT TATTGATGAT ATCTCCCGAA AATTATCGAA ATTCAATTAA ACCGTGGACA
ACAGATTTGG ATCCGTATTT AGAAGAAGTT TGGAATTATA GTTCGGATGG ACAAAAAGTT
GCGATATTAT ATAAACTAAA TATTGAGTAA
|
|---|
| Protein sequence | MRNKNKRLYY KKTLNCSLNE INTRGLIISK LKLPYLMLIL YICLGLFLQY IEVSEIQSFF
GPLNGDQYYQ MGSVNHILSG GNPFESSSMV GGLPGYLALY GILCAGFCKL CSLDAFNGMI
YFSLTIFAFG SFIWYYTFKR IFKDEWTSVI GVVLTNGISM YPILKYTEFT IQIMIPLFIL
AIYLVFTSKK SFNYAFLGLI YGLLAISHNI AFVGATLIIA TFLIYEICKK YSSDKINGLR
EYFKENLKNF GVFFIFGLPI SILYWYRPLF VYKLHQVNNF MIWGVSLNWY NSDVQIEFIF
DVLRSLINVD SLYSALVSVF LINGLVQMYK TRTNSQCKFL KIFGIGCIFA TFSYFITIPL
LNMHFFPNYM SKFYLVTLCS MICIYGLNSL KNTKIIKNHH LRMNLGFTSL FILLMVLTSN
IFVSNMDDWS VAGKNPFPNS QISLYNYLLE NTSSEDTILS TKGLSYFIIG TSGRKLLVNH
WAQQNDPYLD LSERDIDAAI ILYGNNTEKK LELIEKYNVK YIYWDYRWNS TEYQFVNGSE
TPKDPLIAFY KEKYKKQLEE YGIKYTEKTW WVDIYQRNAQ TLDLLMISPE NYRNSIKPWT
TDLDPYLEEV WNYSSDGQKV AILYKLNIE
|
|---|
| |