Gene MmarC7_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0015 
Symbol 
ID5327939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp22468 
End bp22908 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content28% 
IMG OID640792537 
Producthypothetical protein 
Protein accessionYP_001329238 
Protein GI150401944 
COG category[S] Function unknown 
COG ID[COG1673] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00905926 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000816539 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACTATT TTTTATGTAT TACAACTGAA GAAAATGCGA AAGTTATCTT GGATAAAAAA 
ATCTGGGGAG TTTCTGAAAA ATACAAAAAT ACAATTTCAA AGGTTTCCCC AGGTGATCAT
TTAATAATTT ACGAAATGGG AAAATCAAAA ACTAAAACAT CTGAAGCAAA ACCTCAATAT
ATAAGGGCAG TTTATGAAGT AACGTCTGAA CTTAAAGAAG ATACTAAAAA AATCTTTGAA
GCTCACCCAA ACAACCCAAA AGAAGTCTAT CCATTAAGAG TTAAATTAAA AGAAGTTAAA
ATATTTGAAA ATCCGATTTT GTTTAAAGAA TTAGTTCCTG AAATGGAATT TATTAAAAAT
AAAAAGCAAT GGTCTGGTTC TTTAAGAAGA GCAATGGCTC AGATTGGAGA AAAAGATTAT
AAAAAAATTA TTGGGGCTTA A
 
Protein sequence
MNYFLCITTE ENAKVILDKK IWGVSEKYKN TISKVSPGDH LIIYEMGKSK TKTSEAKPQY 
IRAVYEVTSE LKEDTKKIFE AHPNNPKEVY PLRVKLKEVK IFENPILFKE LVPEMEFIKN
KKQWSGSLRR AMAQIGEKDY KKIIGA