| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1770 |
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| Symbol | |
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| ID | 5737771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | + |
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| Start bp | 1659174 |
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| End bp | 1660355 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 641284270 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001549813 |
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| Protein GI | 159906151 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.452955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACTAC TTTCCATATT CGAAACAAAA GAACCAAAAA AAATGCTTGA AAAGGGCATC
GGATATTACA ATAACGGCAA GTATCAAAAA GCGGTAGAAT TTTTTAATAA AACCATTAGT
TCTGAACCAA AAAATCCCGA TGCATGGTAT TTTAAAGGAA ATGCATACCA AAAGCTTGAT
AAACCAAAAT TAGCTCAGGA TTCATATGAA AAAGCACTAT CAATACGTCC AAATGATCCT
GAACTAGTAA AAAACTATGC AATGTTATTA AATTCTTTGG AACTGTTTAA TGAATCTATC
GAAGTTTTGA AAAACGTTTA TGAACCCGAT TCTGAAATTA CTGAAATTTT AGGTATCGCC
TACTTAAAAA CGGGCAGATT TGAAGAAGCA CTTGTAGAAT TCGATAAAAT CTTAGAAAAA
AAACCAAAAT ACAAGCAAGT TCTAGCGAAA AAAGGAACCG CACTTGTCGG ACTTAAAAAA
TTTGATGAAG CTCTCGATAC ATATGAAAAA GTTTTGAAAA TAAGTCCGTA TGATACAGAA
GTATGGAAAA ACATTGGTAA TGCATTTTAT ACTGTTAAAA GGTACGAAAA AGCAATTCAA
TTTTACGACA TGTATTTGTC TGAACATAAA AACGATTTTG AAGTAACCCT ATCAAAAGGA
GATGCTTTGA GAAAACTTGG AAAAACTAAC GAAGCACTTG AATTATATAC AAAAACACTT
GAAAAACACA TAAACAGCTA TGAACCTTGG TGTAGGGTAG GACTTCTTTA TTATGACATT
AAAGATTATG AAACTGCTCT TTATTATTTA GGACTTGCAA ATGAAAGAAA CCCGTTAAAT
CCGTCAATAC TGGTAAAACT TGCTCGAACA TACATTAAAT TGAAAAATTA CAATAAAAGT
CTCGAATTTA TCGAAAAAGC CCTAGATAAA GATAACGGAT ATGCAAAAGC ATGGTGCTAC
AAAGGATACG TTTTGAATAT TTTAGAAAGG CACTACGAAG CAATAGATTG CTACAAAAAA
GCAATCACCT TGAATAAAAA CGTTTCTGAC TTTTGGGTAC AGCTTTCTAA AGTGTACAAA
ACTATCGGAA ATGATGATTA TTCAAAAGAA GCATACGAAA ATGCAGTGAA ACTTGAACCT
CAAGTTTTAA CCTCAAAAAG CACTGAAAGT CCAAGTTTAT AA
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| Protein sequence | MGLLSIFETK EPKKMLEKGI GYYNNGKYQK AVEFFNKTIS SEPKNPDAWY FKGNAYQKLD
KPKLAQDSYE KALSIRPNDP ELVKNYAMLL NSLELFNESI EVLKNVYEPD SEITEILGIA
YLKTGRFEEA LVEFDKILEK KPKYKQVLAK KGTALVGLKK FDEALDTYEK VLKISPYDTE
VWKNIGNAFY TVKRYEKAIQ FYDMYLSEHK NDFEVTLSKG DALRKLGKTN EALELYTKTL
EKHINSYEPW CRVGLLYYDI KDYETALYYL GLANERNPLN PSILVKLART YIKLKNYNKS
LEFIEKALDK DNGYAKAWCY KGYVLNILER HYEAIDCYKK AITLNKNVSD FWVQLSKVYK
TIGNDDYSKE AYENAVKLEP QVLTSKSTES PSL
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