Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_1699 |
Symbol | |
ID | 5737644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | - |
Start bp | 1595632 |
End bp | 1598076 |
Gene Length | 2445 bp |
Protein Length | 814 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641284200 |
Product | DNA topoisomerase I |
Protein accession | YP_001549743 |
Protein GI | 159906081 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA [COG0551] Zn-finger domain associated with topoisomerase type I |
TIGRFAM ID | [TIGR01057] DNA topoisomerase I, archaeal [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGGAC TAATTATCTG TGAGAAACCA AACGTTGCTA AAAAAATTGC AGAAGCTCTT GGAAAACCAA AGAAAAAATC CCATAATTCT GTGCCATATT ATGAAGTGGA ACGAAGTGGG GAAAACGTAA TTGTAGCGTC AGCAGTAGGT CACCTTTACA CGCTGCAAGA AAAAAATAAA GCTAAATTTG GAGATTACCC TGTTTACGAT ATAGATTGGG TTCCAGCGTC AACCCTCGAT GAAAAAAAAT ATATTCAAAA ATACATCGAT GCACTGAAAA AAGTTTCAAA AGAAGCTAAC AAATTTTACG TTGCAACGGA CTGGGATATC GAAGGAGAAT TAATTGGATA TCACGCATTA AATTTCTCAT GTGGTCAGAA AAACGCTCAC AGATTAAGAT TTTCAAGTTT AACGAAGAAA GAAATTGTAA AAGCTTATGA AACACCAAAT GAAATTGATT TTGGACTTGT TGATGCAGGG GACAGCAGAC ACAAAATTGA CTGGTATTTT GGTATAAATG TTTCAAGAGC GCTTATGCAG GCAGTTAGCT CTGTTAAACG ATGGAAAACT CTGAGTACAG GTAGAGTTCA GGGCCCAGCA CTTGCTTTTT TAGTAGATAA AGAAATGGAA ATTAAAAACT TCGTTCCAAC ACCTTACTGG GTGCTCGAAG CTCTTTTAGA TAATGAATTA ATTGCAATTC ACGAGCTTGA AAAATTCTGG GATGAAGATG AAGCAAATAA AGCTTTTGAA AAAGTAAAAG ATCAAAAGCA GGCAACCGTT TCAGATGTTA AAAAAACAAT GAAAAGCATC CCTCCAAATG TGCCTTTCGA TTTAGGTACG CTTCAAAGGG AAGCACACAA TATGTTTAGA TTTTCACCTA AAAAAACGCA AGAAATTGCT CAAAAATTAT ATGAAAAAGG ATACTGTTCA TATCCAAGAA CGAGTTCCCA AAAACTTCCC GATGATAAAG CGTACATGGA AGAAATCCTA AAAAATCTTT CAAAAAATAA AAATTACAGG CCATATATTG AAACAATTTT AAATGAAAAC AGAAAACCAA TTTCTGGTAA AAAGGACGAC CCTGCACACC CTGCAGTACA CGCAGTAGAC GTTCCAAAAG AACATCTTCC TGACGATGAG TTAAAATTGT ATGAACTCAT TGCAAGAAGG ACTATCGCAC TTTACTGGGA TAATGCTGAA AGGGAATATT CGAAAATCAA TCTCGATATA AACGGCGAAA TATTCAAATT AAGCGGTTCG AGAACTGTTA AAGAAGGATG GCATGAAATA TATTACTACA CGAAATTCGA TGAAATAGAA CTTCCAGAAT TAAAAGAAAC AGACATTGTA AAAGTAAATA ACATTAATTT TGAAGCAAAA GAAACGAAGC CTCCAAAAAG ATACACAATG GCTTCAATTA TCAAGGAACT CGAAAAAAGA AAACTCGGAA CAAAGGCAAC AAGAGCAGAT ATTCTTGAAA AGCTGACCAA AAGAGGTTAT GTAATTGAAG ATGGTTCGTT AACCGTTACG GACCTTGGAA TTGGAGTTAC TGAAACTTTA AGAAAATACT GTCCTGAGAT CGTTGAAGAA ACACTTACGA GAGATCTTGA AGATAAATTA GAACTCATCC AGGATAAAAA AATCAAAAAA GAAGACGTTA TAAAGGAAAC TGAAAATAAA CTTACAAAGA TTCTCGGAGA GTTCCGTTTA AAAGAAAAAG AAATCGGAAA TGAACTTGTT GATAAACTTG ATTCAACAAA CCGGTCTTTA CAGATAATTG GAAAATGTAA ATGCGGCGGA GACCTAATCA TCATCCGTAC AAAGGGTAAA AAAAGATTTG TTGGATGCAG TAACTATCCA GACTGTGATA TTACATTCCC GCTACCCCAG AAAGGAAGAA TCAAAGTTTT AAATGAAGTT TGTGAAACAT GCCATAATCC AGTAATTGGA TTAGATAGAG TAAAAATCTG TGTAAATCAG GATTGTAACA CAAGAATTTC AGAAGAAGAT AAAAAAGAAA TTGAAAAAGC CGAAAAAGAA GAAAAAATAT GTCCAAAATG CGGTGGCAAG CTTTTAATTA AAAAAGGCCC TTACGGGGTT TTCCGTGGCT GTGAAAATTA CCCTAAATGT AAATATACTG AAAAATTAAA CGGAGAATCC AATGAAAAGG AAATCGTTGG AAAATGCCCA AAATGTGGAA GCGACTTATT TAAAAGAAGG GGCAGATTCG GGGAATTTAT TGGATGCAGC AATTATCCAA AATGCAGACA CACTGAAAAA ATAGAAAAGA AAAAAGACTA TAATTCAAAA GAAACTAAAG CGGAAAAAAA GGAAACAACA AAACCAAAAA CCGCTAAAAA AACAACTACA AAAAAGACAG AAACCAAAAA AACCACTAAA TCCGCTGCTA AAAAAACAAC TACAAAGAAA ACTGCGAAAA AATGA
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Protein sequence | MTGLIICEKP NVAKKIAEAL GKPKKKSHNS VPYYEVERSG ENVIVASAVG HLYTLQEKNK AKFGDYPVYD IDWVPASTLD EKKYIQKYID ALKKVSKEAN KFYVATDWDI EGELIGYHAL NFSCGQKNAH RLRFSSLTKK EIVKAYETPN EIDFGLVDAG DSRHKIDWYF GINVSRALMQ AVSSVKRWKT LSTGRVQGPA LAFLVDKEME IKNFVPTPYW VLEALLDNEL IAIHELEKFW DEDEANKAFE KVKDQKQATV SDVKKTMKSI PPNVPFDLGT LQREAHNMFR FSPKKTQEIA QKLYEKGYCS YPRTSSQKLP DDKAYMEEIL KNLSKNKNYR PYIETILNEN RKPISGKKDD PAHPAVHAVD VPKEHLPDDE LKLYELIARR TIALYWDNAE REYSKINLDI NGEIFKLSGS RTVKEGWHEI YYYTKFDEIE LPELKETDIV KVNNINFEAK ETKPPKRYTM ASIIKELEKR KLGTKATRAD ILEKLTKRGY VIEDGSLTVT DLGIGVTETL RKYCPEIVEE TLTRDLEDKL ELIQDKKIKK EDVIKETENK LTKILGEFRL KEKEIGNELV DKLDSTNRSL QIIGKCKCGG DLIIIRTKGK KRFVGCSNYP DCDITFPLPQ KGRIKVLNEV CETCHNPVIG LDRVKICVNQ DCNTRISEED KKEIEKAEKE EKICPKCGGK LLIKKGPYGV FRGCENYPKC KYTEKLNGES NEKEIVGKCP KCGSDLFKRR GRFGEFIGCS NYPKCRHTEK IEKKKDYNSK ETKAEKKETT KPKTAKKTTT KKTETKKTTK SAAKKTTTKK TAKK
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