| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1696 |
|---|
| Symbol | |
|---|
| ID | 5737411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | + |
|---|
| Start bp | 1593687 |
|---|
| End bp | 1594589 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641284197 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_001549740 |
|---|
| Protein GI | 159906078 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0492] Thioredoxin reductase |
|---|
| TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATATG ATTTAATCAT TATCGGGGGC GGTCCTGCGG GACTTACTGC CGGAATATAT
GCAATGCGGG CTAAATTAAG TACTTTATGC CTTGAAAAAG AAAATGAAGG CGGAAAAATT
GCAGAAGCAG GAATTGTTGA AAATTATCCT GGTTTTGAAT CAATAAAAGG TTTTGAACTT
GCACAAAAAT TTTCAGAACA TGCAAAACAC TTCGAACTTC CAATAATCCA CGAAGAAGTT
GAAAAAATAG ATACTTCGTC AAAACCCTAC AAAGTAATTA CTAAAAATGA AAAGTACGAA
GCAAAATCGA TAGTAATTGC ATCAGGAAGC CGTTACAAAA AGCCAGGGTT AAATGAAGAC
GATTTTAATG GAAAAGGCGT CTGTTATTGT GTAATGTGTG ATGCTTTTTT CTTTTTAAAC
AAAGAAGTAA TCGTACTTGG GAGGGGAACT TCTGCGATAA TGGCAGCATA TAATTTGAAG
GATATCGCAA AGAAAATAAC GATTGTTACC GATAGGTCCG AATTAAAGGC AGTTGAAAAA
ATAATGGAAG ACAGAATGAA CCTAATGAAT AATCTTGAAA TAGTTTACAA CGCAGAACCG
ATCGAGATTG TTGGGGAAGA AAAAGCAGAA GGGGTTAAAG TTTCGATAAA TGGAAAAGAA
GAGATAATTT CAGCCGATGG AATATTTATA AGCTTTGGAT ACGTTCCAAA TACGGAATTT
TTGGAAAAAA GCGATATAAA ACTTAATAAA AGAAAATTCG TAGAAATAGA CGAAAACTGT
AAAACTAGTG TAGATGGAAT TTATGCCTGC GGGGATGTTA CAGGTGGAAT TTTACAGGTT
TCAAAGGCAG TAGGTGAAGG CGTTACTGCA TTTACAGGTG CTTTGAGTAG CATTCAAAAA
TAA
|
|---|
| Protein sequence | MAYDLIIIGG GPAGLTAGIY AMRAKLSTLC LEKENEGGKI AEAGIVENYP GFESIKGFEL
AQKFSEHAKH FELPIIHEEV EKIDTSSKPY KVITKNEKYE AKSIVIASGS RYKKPGLNED
DFNGKGVCYC VMCDAFFFLN KEVIVLGRGT SAIMAAYNLK DIAKKITIVT DRSELKAVEK
IMEDRMNLMN NLEIVYNAEP IEIVGEEKAE GVKVSINGKE EIISADGIFI SFGYVPNTEF
LEKSDIKLNK RKFVEIDENC KTSVDGIYAC GDVTGGILQV SKAVGEGVTA FTGALSSIQK
|
|---|
| |