| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1472 |
|---|
| Symbol | |
|---|
| ID | 5737279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | + |
|---|
| Start bp | 1373923 |
|---|
| End bp | 1374474 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 641283973 |
|---|
| Product | nuclease |
|---|
| Protein accession | YP_001549517 |
|---|
| Protein GI | 159905855 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGGA TAGTTTTTTT AGCCCCGATT TTAGTTTTGA TTTTTTCAGG TTGCATTTCT
GATAATGATA TCGATTCAGG AGATTTCATA GATTCTCACG AACACCTTTT TGGAACTGTT
ACCAGAGTAG TTGACGGAGA TACTGTCCAT GTTGATTCAA ACGGGGTAGA TTATAATATC
CGGCTTTTAG GGGTTGATAC TCCAGAAACT TATCAGAAAA ACAGTGTTTC AGAATATTAT
ATCGATTATG AAACTCCAAT TTCAGATGTA GAATATTTGG ATTACTGGGG GCATTTGGCA
ACAAACTATA CGCGAGATAC TCTTGAAAAC AAATCGGTTT ATGTGGTTTT TGATAAAAAA
AGTGACAAAC AGGATAAATA CGGACGATAC CTTGCGTACA TATATTTGGA AAATGAAAAT
TTCAATGAAA ATTTGATAGA ATATGGCTTT GCAAGAGTAT ATGTTAGTGA TTTTGAATTG
AAGAATAATT TTTTAGAAAC TGAAAAAACA GCAAAATCTG AAAAGGCTGG TCTTTGGAAC
TACAACAACT GA
|
|---|
| Protein sequence | MKRIVFLAPI LVLIFSGCIS DNDIDSGDFI DSHEHLFGTV TRVVDGDTVH VDSNGVDYNI
RLLGVDTPET YQKNSVSEYY IDYETPISDV EYLDYWGHLA TNYTRDTLEN KSVYVVFDKK
SDKQDKYGRY LAYIYLENEN FNENLIEYGF ARVYVSDFEL KNNFLETEKT AKSEKAGLWN
YNN
|
|---|
| |