| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1332 |
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| Symbol | |
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| ID | 5737738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | - |
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| Start bp | 1237955 |
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| End bp | 1240936 |
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| Gene Length | 2982 bp |
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| Protein Length | 993 aa |
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| Translation table | 11 |
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| GC content | 25% |
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| IMG OID | 641283827 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_001549377 |
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| Protein GI | 159905715 |
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| COG category | [L] Replication, recombination and repair
[V] Defense mechanisms |
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| COG ID | [COG0419] ATPase involved in DNA repair
[COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTATTA AAAATATCAA AATGGAAAAC TTCAGAAGCC ATAGAAACAC CTCGATAAAT
TTTAACAAAG GAATAACTTC GATAATCGGG CAGAACGGGA GTGGAAAATC GTCAATTTTT
CAAGCAATGA ATTTTGCACT TTTTGCTCCG CGTGGAAGCA ATTTTAGAAT TGAAAATTTA
ATGCAACAGG GCGCTGCATC ATTTTCTGTA GAATTGGAAT TTGAAATGAT GGGAAATACA
TATCTTGTAA AAAGAAAAAG GTTTCAAAAT AAAACAGATG ACAAATTATA CGTTAACGGA
AAATTAAATG CTGAATCTGC ATCTGAAATT AATAAAAAAA TTGAAGAAAT TTTAGAAATT
GATAACAGTG TATTTTCAAA TGCGATATAC ATAAAACAGG GCGAAATTGC AAATTTAATC
CAGATGACTC CAAGGGATCG GAAAGAAGTT ATTGGAAAAC TCCTTGGAAT TGAAAAGTAC
GAAAAAGCCT CTGAAAAAAT GAATATTGTA AAAAAAAGCT ATGAAGAAAT GCTTTTTAAA
CTTGAAGGGG AGCTCGTCCA AGAACCTGAA ATTTTAGAAA ATCTTGAAAA ATTAAAAAAT
GAAGTTTCTG AATCTGAAAT TTTAAAAAAA GAAATTTTAA AAAAATATGG AAATTTAGAA
AAACTAAAAC TCGAAAAAAA TTCAGAATTA ATCCAAATAG AAGAAAAATT TGCGGAAAAT
AATCAGTTGA AAGAAAATTT AAAAGATGTT ATTTCAGAAA TAAAAAATAT AAATTTAGAA
ATTCAAAATT TCAAAAATTC ACGGGAGTTA GTTGTTGAAG AATCTGAAAA CTTATCCAAC
AATGAAGAAA CTTACAAAGA ATACTTAGAA TTTGAATTAA AAATTAAAGA ATTAAATAAT
AAGTTAATAA GCCATAAATC AGACTACGAA TCATACAATA AACTAAAAAC GATTGAAGAA
TCATTGTTAA AAGAATTAAA TGTATTAAAA GAATCTTTAA AGAATAATGA AAAAAATTCT
GATGAATTAA AAAAAATTTT AAGAGAAAAC GAAGAAAAAA TTCTAATTTT AGATAAAATA
AAAGAAAAAA TCAAGGAATT GGAATTTATT GAAAAACAGA TTTATGAAAT AGAAACCCAC
AAAAAAACGG TAGAAACACT TCAGAATAGT GTTAAAATTT ACGAAGACTC GATTAAAACT
TTTGAAGAAC TGAAAACTAA AAAAAATAGT TATGAAATTC TTTTAAAAGA AAAGATCGAT
CTTGAAAAAA AACTTCAAAA CGAAAATGAC GAAAAAACAA AATTAATCTC ACAATTAACT
GTTTTTGAAA AAATTGAAGA AAAAATAAAT CTTGAAAATG AATTGAAAGA AAAATATGAA
GAATTATCTG AAAAAATAGA TAAATTAAAT GAAATCGTTT TGAAAAAAGA AAGTAAAATC
TTAGAAATTA AAAATTCTAA GACAGAACTT GAAAAAACTA AAGATTCATG TCATGTCTGC
CAATCAAAAA TAAGTGAAGA AAAAAAGCAG GAACTGCTTG AAAAATATAC TTCTGAAATT
CAAAACGAAG AATTATCGGC TGAAAGTCTT AAAAAACAGC TTGAAATTAT ATTAAAGAAA
AAAGAAGAGA TTAAAGTTAA ATTAAATGAA ATTGATTCGT TCAAATTAAA ATACGGGGAA
CTAAAAGAAA AAAAGAATTA TTCTTTGAAA ATTGAAGAAT CAATAATTGA AACTACTGAA
AAAATTAACG AGTTAACTGA AAAAATTAAT GAATATTCTT CATTTAATGA TGAAATAATT
TTAGTTGAAA ATAAATTAAA AGATTTGGAA AAAGATTATA AAAATTACAA TTATTCCAAT
CAATTTTTAA CCAAAAATGA CGAATCTGAA ATTTTAAAGA AAAGATTGGA ACTTTCAAAA
ATTATTGGAG ATTACGATTT TTCAAAAATT GAAAATGAAA AAAAATCCCT CGAAACGCGA
AAAGATGAAT TAAAAAATAC CATTTACAAT TTAGAAAGAG AAATTAACTT AAAAACTGAA
TTAAAAAATA TTCAAAACGA TATTTCTTCA AAAATAGGAA TTTTTGAATG TTACATTAAA
TGGGAAACTC AAAAATTGGA TTTTGAAAAC AAGTTATCAG AATGTAAAGG AAATTATGAA
AAATATATGG AAAGTCTGGC AGTTCTTAAA AACTATTCTA AGACGTATTC TGTTGAAATA
AATAATTTAA ATGAGTTTTT AAACCAAAAA ATTGCTGAAA AACAGCTACT TTGTGAAAAA
CTCCTTGAAA CACGGCTAAA AATTGAAAAA AATATTCAAA GTATAAACTA TAATCCAGAC
TTACACGAAA ACGCTAAAAG ACTTTACGAA AATATATTAA ACGAATTTAA TGATATTTCA
AGAACTTTGG AGAGAATAAC TTCCGAATTA AAACTCAAAA ATGAGAATAT AATTTATTTA
ACTGAAAAAA TTCAAAACTT GGCGAATAAA AAAGAAGAAA GAAAAAAAAT TGAAGAATTT
AAAGAATACC TCGATAAAAT AAAAAGAGAA ATCTTTTCAA AAGATGGTTT TCAGAGATAT
TTAAGAGAAA AGTATATTCC GTTAATTCAA CGGCATACAA ACCAGATTTT TCAGGAATTT
GAACTTCCAT ATTCCCATAT TCAATTAAAA GACGATTACA GCTTGATAGT TGATGGCCTT
CCAGTTGAAA CATTGAGTGG AGGGGAACAG ATTGCAGTTT CACTTGCATT AAGGCTTGGA
ATTTCTAAAG CGGTTTGTAA TAATATTGAA TGCATTATTT TAGATGAACC TACAGCGTAT
CTTGACGAAG ATCGCCGTAA AAACCTTTTA AATATCTTCA AAAACATAAA AACAATAAAC
CAGATGGCGA TAATTACGCA TCACCAAGAA CTCGAACAGA TTGCAGATAA TATTGTAAAA
GTTAGAAAAA TCGGCGAAAA TTCAAAAATA TCTTTAGAAT AG
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| Protein sequence | MIIKNIKMEN FRSHRNTSIN FNKGITSIIG QNGSGKSSIF QAMNFALFAP RGSNFRIENL
MQQGAASFSV ELEFEMMGNT YLVKRKRFQN KTDDKLYVNG KLNAESASEI NKKIEEILEI
DNSVFSNAIY IKQGEIANLI QMTPRDRKEV IGKLLGIEKY EKASEKMNIV KKSYEEMLFK
LEGELVQEPE ILENLEKLKN EVSESEILKK EILKKYGNLE KLKLEKNSEL IQIEEKFAEN
NQLKENLKDV ISEIKNINLE IQNFKNSREL VVEESENLSN NEETYKEYLE FELKIKELNN
KLISHKSDYE SYNKLKTIEE SLLKELNVLK ESLKNNEKNS DELKKILREN EEKILILDKI
KEKIKELEFI EKQIYEIETH KKTVETLQNS VKIYEDSIKT FEELKTKKNS YEILLKEKID
LEKKLQNEND EKTKLISQLT VFEKIEEKIN LENELKEKYE ELSEKIDKLN EIVLKKESKI
LEIKNSKTEL EKTKDSCHVC QSKISEEKKQ ELLEKYTSEI QNEELSAESL KKQLEIILKK
KEEIKVKLNE IDSFKLKYGE LKEKKNYSLK IEESIIETTE KINELTEKIN EYSSFNDEII
LVENKLKDLE KDYKNYNYSN QFLTKNDESE ILKKRLELSK IIGDYDFSKI ENEKKSLETR
KDELKNTIYN LEREINLKTE LKNIQNDISS KIGIFECYIK WETQKLDFEN KLSECKGNYE
KYMESLAVLK NYSKTYSVEI NNLNEFLNQK IAEKQLLCEK LLETRLKIEK NIQSINYNPD
LHENAKRLYE NILNEFNDIS RTLERITSEL KLKNENIIYL TEKIQNLANK KEERKKIEEF
KEYLDKIKRE IFSKDGFQRY LREKYIPLIQ RHTNQIFQEF ELPYSHIQLK DDYSLIVDGL
PVETLSGGEQ IAVSLALRLG ISKAVCNNIE CIILDEPTAY LDEDRRKNLL NIFKNIKTIN
QMAIITHHQE LEQIADNIVK VRKIGENSKI SLE
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