| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1328 |
|---|
| Symbol | |
|---|
| ID | 5737286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | + |
|---|
| Start bp | 1235459 |
|---|
| End bp | 1236253 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641283823 |
|---|
| Product | undecaprenyl diphosphate synthase |
|---|
| Protein accession | YP_001549373 |
|---|
| Protein GI | 159905711 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.190742 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCGTTAT TTAAATTTTA TGAATATTTG GGCAAATTTG GAGCATTAAA ATTGTATGAA
AAGGAACTGG AATCAAAAAC TTCCAAATAT CCTCTCCCAA AACACGTTGG AATAATTATG
GATGGTAACC GGAGGCTTGC AAAAAAATTA GGCGAAAATC CCGAACTCGG CCATAATTTA
GGCGCTTCAA AGGTTCATGA AGTTATAGAT TGGTGTGTTT CTTTGGGGAT TCCCACTATT
ACGTTATATG CATTTTCTCT GGAAAATTTT AATCGGCCAG AAAAAGAAGT AAAAGTTTTA
ATGGACCTTT TTGAAAAAGA ATTCCTTGAA ATTGCAGATC ACCCCGATAT TCACAAAAAT
AAAATACGTG TAAGCGTTAT TGGAAGAAGG GAAATGCTTC CAGAATACGT CCAAAAAGCA
ATTAGTTATG CGGAAGATAG AACAAAGGAA TATTCCGATT ACTTTGTTAA TTTTGCAATT
GCATACGGTG GGCAGCAGGA AATAATTGAC AGTGTCAAAA AGATTGCAGA AAAAGTAAAA
AATAACGAAA TAGAAATTGA AGATATAAAT GTAGAATTAA TATCTAAAAA TCTATACACG
AGTAATCTTC CATCACCAAA CCCTGATTTA ATTATTCGAA CATCTGGGGA AGAGCGAATA
AGTAATTTTT TAACTTGGCA GTCCTGTTAT TCAGAACTAT ATTTTTGCGA GACGTACTGG
CCGACATTTA GAAAAGTTGA TTTATTGAGG TCCATTCGGG AATATCAAAA ACGTGAAAGG
AGATATGGGA AGTGA
|
|---|
| Protein sequence | MPLFKFYEYL GKFGALKLYE KELESKTSKY PLPKHVGIIM DGNRRLAKKL GENPELGHNL
GASKVHEVID WCVSLGIPTI TLYAFSLENF NRPEKEVKVL MDLFEKEFLE IADHPDIHKN
KIRVSVIGRR EMLPEYVQKA ISYAEDRTKE YSDYFVNFAI AYGGQQEIID SVKKIAEKVK
NNEIEIEDIN VELISKNLYT SNLPSPNPDL IIRTSGEERI SNFLTWQSCY SELYFCETYW
PTFRKVDLLR SIREYQKRER RYGK
|
|---|
| |