| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1325 |
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| Symbol | |
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| ID | 5737347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | + |
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| Start bp | 1233109 |
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| End bp | 1234191 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 641283820 |
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| Product | bifunctional RNAse/5-amino-6-(5-phosphoribosylamino)uracil reductase |
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| Protein accession | YP_001549370 |
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| Protein GI | 159905708 |
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| COG category | [H] Coenzyme transport and metabolism
[L] Replication, recombination and repair |
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| COG ID | [COG1658] Small primase-like proteins (Toprim domain)
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.264081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAGC AGGAATCTTT AGAAAAACTC CTTTTAATAA TCGATGATCT AAAATTACTG
GCTGAAAAAG GAATTCCCCT ATTGGTGGAA GGTCCAAATG ATATATTATC CTTGAAAAAT
TTAAAAATAA ATGCTAATTT TATAACTGTG TCAAATACTC CTGTATTTCA GATAGCAGAC
GATTTAATTG CAAGAAACAT CTCCGAAGTT ATACTTTTAA CCGATTTTGA TCGAGCCGGT
AGGGTTTATG CTAAAAATAT AATGGAAGAA TTTCAAAGCA GGGGAATTAA GGTAAATAAT
TTGATCAGAA AAGAAATAAT TAAATATTCT CGCGGAGATT TGAAGGATAT TGAAAGTTTA
TATCCGTATA TTTCGAGAAG AATTAATATT AACAGCGATT TAAGTGATAT CATGCTTCCT
TATGTTATAT CAAATGTTGG AATGACTTTA GATGGAAAAC TGGCTACAAT AGAAAATGAT
TCAAGAATTT CTGGTGAAAA CGATTTAAAA AGAGTTCACG AAATAAGAAA GGACGTAGAT
GCAATCATGG TCGGAATTGG AACTGTTTTA AAAGACGATC CAAGACTCAC GGTTCACAAA
ATCAATGCAT CGCCAAAAGA CAATCCTCTA AGAATTGTGA TTGATAGCAA TTTAAAAATC
CCATTAAATG CAAGAGTACT AAATAATGAT GCAAAAACCG TAATTGCAAC AACAACGCCG
ATTTCATACG AAAAAGAAGA AAAAATCAGA AAATTAAAAG AAATGGGAAT TATGGTATTG
CGGGCAGGGG TTCAAAAAGT TGATTTAAGA AAAATTATGA ACGAAATTTA CAAAATGGGA
ATAAATAAAA TTCTTCTCGA AGGTGGCGGA ACTTTAAACT GGGGAATGTT TAAAGAAAAC
TTGATAAACG AAGTTAGGGT TTATATCGCT CCAAAAATAT TCGGAGGGTC AAATTCTCCA
ACATATGTTG ATGGAGAGGG ATTTAAAAAC GTTGAAGAAT GTACAAAATT AGAATTAAAA
AAATATTATC CATTGGATGA CGGAATTGTC CTAGAATATC GGGTAAGTGG ATCTTCTAAG
TAA
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| Protein sequence | MDKQESLEKL LLIIDDLKLL AEKGIPLLVE GPNDILSLKN LKINANFITV SNTPVFQIAD
DLIARNISEV ILLTDFDRAG RVYAKNIMEE FQSRGIKVNN LIRKEIIKYS RGDLKDIESL
YPYISRRINI NSDLSDIMLP YVISNVGMTL DGKLATIEND SRISGENDLK RVHEIRKDVD
AIMVGIGTVL KDDPRLTVHK INASPKDNPL RIVIDSNLKI PLNARVLNND AKTVIATTTP
ISYEKEEKIR KLKEMGIMVL RAGVQKVDLR KIMNEIYKMG INKILLEGGG TLNWGMFKEN
LINEVRVYIA PKIFGGSNSP TYVDGEGFKN VEECTKLELK KYYPLDDGIV LEYRVSGSSK
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