Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0997 |
Symbol | |
ID | 5738904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | - |
Start bp | 945261 |
End bp | 946901 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641283483 |
Product | type II secretion system protein E |
Protein accession | YP_001549044 |
Protein GI | 159905382 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGATG ATTTCAAAAA TGCACAAATG AACAATCCCC ATTTGAGAAA TTACGTTGAA AAATTTAAAA AAACCTACAT GAAAATTCCA GAATTTGTTC CAAGCCTTTC AAGGGATTTT AAAGAAATAA GATATCCAAA TATAATTTAT CCGATAGGGG ACCCGATATT TATCCACCTT TACGGAACCC CAAACTTAAA AACAAGATAT ATCGCAATAG AACCTAAATT AGGGGGTTCG GATGAAAGAA AAAAATATTT TGAAATCCTC GATAAAATTT TAGAATACGC ACCATATAGC GATACCCCGG AAAATGATGA AGAATTTGGA AAAATAGTCA CAAAACTATT TGACCAGGTT ACAAAAGTAT CCACTCAAAA AAACGAAAAG AAAAAAGGAT TGTTGACAAA ATTAACAGAT TCCGGAAAAA TAAATGTATC AAAACCTGAA AGGGAAAAAT TCCTCTATCT ATTGAAAAGA GACCTAATTG GACTTGGAAC TCTCGAACCA ATAAAAAGAG ACCCCTACAT TGAGGATATT CACGTAATCG GTGCTAAAAA CTGTCAGCTT GTTCACAAAA TCTACGATAT GCTTCCATCA AATATTGAAT GGGAAGATGA AGGAGATATT TCAAATTACC TGAAAAACAT GTGTGAAAGG ATCGGTAGAC CAGTTTCTGA TGCCACACCA ATTGTGGATG GTTCCCTGCC CGATGGATCA AGGATAAATA TTCTTTATTC GGGAGACGTT TCATTAAAAG GCCCTTCATT TACAATTCGT AAATTTACAG ATGTTCCGAT AAGTATTACC CAAATTATCA GCTGGGGTAC GATGTCTGCA CAGACTGCCG CCTATTTATG GCTTTGCCTT GAATACGGGA TGAGTATATT CATCTGCGGG GAAACTGCAT CAGGAAAAAC TACCTCTTTA AACGCAATTT TGCCTTTCAT CAAACCGAAA TCAAAAATAT TTTCCTGTGA AGATACTTCA GAAGTAAAAC CTCCAAACCC CGTATGGCAG CAGTTATTAA CCAGAGAAAG AGGCCCTGAA GAGAGTAGAG TTACACTATT CGATCTTTTG AGAGCTGCTT TGAGGTCAAG GCCAAACTAT ATTATTGTAG GGGAAATCAG GTCTGTAGAA GGGGCTGTTG CATTCCAAGC AATGCAGACA GGTCACCCAG TAATTTCAAC GTTCCACGCT GCAAACGTTA GAAAAATGAT TCAAAGGCTT ACGGGAGACC CGATATGTAT TCCGCAAACA TTTATGGATA ACTTAAACGT CTGCCTGTTC CAGCTTGCAG TTTACGCTAG AGGAAAATTC TTGAGAAGGG TTGTTTCAGT TGAAGAAATT GAAGGATACT ACAAAGAAGT TGATGGGGTT ATTACAAGAG GTGTCTTTGA ATGGGACCCT CAAAAAGACA CCCATAACTT TACCGGGCTA AATAATAGCT ACATTCTTGA AGATAAAATT GCAACGGTTG CAGGATATGA AGATCCAAGA GAAATCTACG ATGAACTTGA TTTAAGGGTT AGAATTCTCG AAGAAATGAT TGCAAGAGGA ATCTTTGGAT ACTACGAGGT TTTAGATATT ATCTGGAGTT TCTATGAAAA AGGATTGGAA GGACTGCCAT TCCAGGTTTA A
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Protein sequence | MADDFKNAQM NNPHLRNYVE KFKKTYMKIP EFVPSLSRDF KEIRYPNIIY PIGDPIFIHL YGTPNLKTRY IAIEPKLGGS DERKKYFEIL DKILEYAPYS DTPENDEEFG KIVTKLFDQV TKVSTQKNEK KKGLLTKLTD SGKINVSKPE REKFLYLLKR DLIGLGTLEP IKRDPYIEDI HVIGAKNCQL VHKIYDMLPS NIEWEDEGDI SNYLKNMCER IGRPVSDATP IVDGSLPDGS RINILYSGDV SLKGPSFTIR KFTDVPISIT QIISWGTMSA QTAAYLWLCL EYGMSIFICG ETASGKTTSL NAILPFIKPK SKIFSCEDTS EVKPPNPVWQ QLLTRERGPE ESRVTLFDLL RAALRSRPNY IIVGEIRSVE GAVAFQAMQT GHPVISTFHA ANVRKMIQRL TGDPICIPQT FMDNLNVCLF QLAVYARGKF LRRVVSVEEI EGYYKEVDGV ITRGVFEWDP QKDTHNFTGL NNSYILEDKI ATVAGYEDPR EIYDELDLRV RILEEMIARG IFGYYEVLDI IWSFYEKGLE GLPFQV
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