Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0941 |
Symbol | |
ID | 5738679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 881931 |
End bp | 883685 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641283421 |
Product | DNA polymerase II small subunit |
Protein accession | YP_001548988 |
Protein GI | 159905326 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1311] Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAACG ACTTTTTAAA CATTCAGGTA CTTTTAGCCC CTGATTCCTA CTCAAGAATC CAAAATCTTG ACACCGAAGA TTTTTCAGAT TTATTCGATA AGATAAAAGA ATTTAAAAGT AAAAAGGACG ATTTTATACT CCTCGATTCG CATTTTTTAA ACATTTTTTT GGGAAATAAT TTAAAAAATA TTTTTGAAGA CTACGGAAAA TTCGATTTTT TAGCATACTA CACGTCAAAC GAAGTGACAT CAGAAAATCA GGAAATTATC GAACAAACAG ATGATTTTGA ACCTGTTGAA CCGGAAGTTT TGATGGAAAA AGAAATTAAA AAAGAAACTA AAGTTTACGA TCTCGATTTT GAAGATGTTG AGGAAGAAGT ACCTGAACTC GATGAGGTAC ATAAAAAATT GGAAGAAGAG CGAAAAGAAA GGCTTTTAGA AATAAGATCT ATTCGAGAAA GTGTTAATAA CAAAATAAAC TACTACGCAA AAGATATCGA AGCACAAATA CACGTTTATG ATGAATACGA CGTTACCGGA AAATCTACCT GTGAAGGAAC ACTCGATGAC TTTGTGAAGT ATTTTAAGGA TAGATGCAGT ACTTTAAGAA AAATAATTGA ATTAAAAGTT CAGAAGAAAG CCTACCCACT AAACCAGCTT TTCAGGAGAA AAAAAGAAAA TGAAGTTTTC ATCGCAGGAA TTGTATCAGA TGTGAATTCC ACCAAAAATG GACACAAAAT GATTGAATTG GAAGATGAAA ATGGAACGTT CAGACTTCTT TTGATGAAAG ACAAAATGGA CAAGGGGGAT CTTCCATCAG ACGTTCTTTT AGATGAAGTT ATCGGTTTTG AAGGAACTAT TAATGATAAA GGAGACTTAA TGTTTGTAGA TCGGGCTTTT AGACCGGATA TTACTCCAAA ACCTACAAAA ACGACAGACG AAAAGATATA CACTGCATTT TTGTCAGACG TTCACGTTGG AAGCCACGAG TTTTCAAACA AAGTATTTGC AAAATTTATT AAATTCTTAA ACGGGGATGT AAATAGCGGT TTAGAAGAAA AAATAGTAAG CAGGTTGAAA TATATTTCAA TTGCAGGAGA TCTGGTGGAT GGAGTTGGAA TTTATCCTGG TCAAGAGTAC GATCTTTATG ATGTGGATAT AATTTCACAG TATGCAGAAG TTGCAGCTTA TTTAGAGCAG GTTCCAGAAC ATATAAAATT CATAATTTCT CCGGGAAACC ACGATGCGTT AAGACCTGCG GAACCGCAGC CTACATTTGA TGAATCGATA ACAAGCCTGT TTCCAAAAGA AAATGTAACT TTTGTTGGAA ACCCCGGTGT AGTAAACATG CACGGCCTTG ATTTATTATT ATATCACGGT AGAAGTTTTG ATGATATTAT CGGACAGGTT TCAGTAGCAC AATATACAAA TCCTCCATCA ATTATGAAAG AACTTTTAAA AAGAAGACAT TTATGTCCAA CATACGGTGG ACGATGCCCG ATAGCTCCGG AACACATCGA TTACCTTGCA ATACACACAG AACCGGATAT TTTCCACACC GGACATATTC ATATCAACGG CTATGGTAAT TATCACGGAG TTAGGATGAT AAACAGCGGT ACGTTCCAGG AACAAACCGA TTTCCAAAAG AGAATGGGTA TCAAGCCTAC GCCGGGAATT GTTCCGATAC AGGATTTGTC TAAAAAAGAA ACTCACGTAA TTGAGTGGAA TCAGGGAAAA ATCGAAATAA GTTAA
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Protein sequence | MINDFLNIQV LLAPDSYSRI QNLDTEDFSD LFDKIKEFKS KKDDFILLDS HFLNIFLGNN LKNIFEDYGK FDFLAYYTSN EVTSENQEII EQTDDFEPVE PEVLMEKEIK KETKVYDLDF EDVEEEVPEL DEVHKKLEEE RKERLLEIRS IRESVNNKIN YYAKDIEAQI HVYDEYDVTG KSTCEGTLDD FVKYFKDRCS TLRKIIELKV QKKAYPLNQL FRRKKENEVF IAGIVSDVNS TKNGHKMIEL EDENGTFRLL LMKDKMDKGD LPSDVLLDEV IGFEGTINDK GDLMFVDRAF RPDITPKPTK TTDEKIYTAF LSDVHVGSHE FSNKVFAKFI KFLNGDVNSG LEEKIVSRLK YISIAGDLVD GVGIYPGQEY DLYDVDIISQ YAEVAAYLEQ VPEHIKFIIS PGNHDALRPA EPQPTFDESI TSLFPKENVT FVGNPGVVNM HGLDLLLYHG RSFDDIIGQV SVAQYTNPPS IMKELLKRRH LCPTYGGRCP IAPEHIDYLA IHTEPDIFHT GHIHINGYGN YHGVRMINSG TFQEQTDFQK RMGIKPTPGI VPIQDLSKKE THVIEWNQGK IEIS
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