Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0929 |
Symbol | |
ID | 5738653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 871877 |
End bp | 872302 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641283409 |
Product | nickel responsive regulator |
Protein accession | YP_001548976 |
Protein GI | 159905314 |
COG category | [K] Transcription |
COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
TIGRFAM ID | [TIGR02793] nickel-responsive transcriptional regulator NikR |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGATA TGGATAGAAT AAGTATCTCA TTACCTACAA ATTTACTTGC AGAATTCGAT GAAATAATCG AAGAAAGAGG ATATGCAAGC AGAAGTGAGG CCATAAGGGA CTCCATCAGG GATTATCTGA TAAAACATAA GTGGATTCAC AGCCTTGAAG GGGATAGGGC TGGAACGATC AGTATTATTT ATGATCACCA TTCCACAGAT GTAATGGAGA AACTAACAAA CATACAGCAT GACTATGAGA AATTAATCGT TGCAACGATT CACATGCACC TTGATCACGA CCACTGTATG GAAGTAGTTC TCGTTAAAGG GGATGCATCA GACATCAAAG AATTAACCGA CAAACTTACG TCACAAAAGG GCGTAAAACA GGTAAAACTT ACAGTGATGG TTCCGGGCGG AAACATTCCT CAGTAA
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Protein sequence | MVDMDRISIS LPTNLLAEFD EIIEERGYAS RSEAIRDSIR DYLIKHKWIH SLEGDRAGTI SIIYDHHSTD VMEKLTNIQH DYEKLIVATI HMHLDHDHCM EVVLVKGDAS DIKELTDKLT SQKGVKQVKL TVMVPGGNIP Q
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