Gene MmarC6_0894 details

Gene Information

• Locus tag: MmarC6_0894
• ID: 5738636
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C6
• Kingdom: Archaea
• Replicon accession: NC_009975
• Strand: +
• Start bp: 831205
• End bp: 831684
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 641283369
• Product: putative RNA-binding protein
• Protein accession: YP_001548941
• Protein GI: 159905279
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG2016] Predicted RNA-binding protein (contains PUA domain)
• TIGRFAM ID: [TIGR00451] uncharacterized domain 2

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAATAA AAAGAAGATA TATGCTAAAA AAGAAAGAAT TAAAGGAATT AAAAGATGAA 
CTTGGAAATA TTTTTGACGT TGAAAAAATA ATTCCAAAAA AAGCAGTCGT TGAAAAAGCG 
GTAACAGAAG AAGGCGAAAT AATCCTTTTG GATGGAACTC CGCTTGCAAT GGTAAATAAT 
GGAAGGATAT TTCCGACACT AAAATTCCTA TTAAATATGG ATATTGAAAA CAACAGGGTT 
ACTGTCGACA TGGGTGCCGT AAAATTCATC GCAAATGGTG CAGACATTAT GGCTCCAGGA 
ATTGTCGAAG CTGACGAAAA TATCAAAGAA GGGGACATTG TTTTTGTAGT CGATGTAACT 
CACAAAAAGC CGTTGTCTGT TGGAGAAGCT TTGATGGATG GAAAAACCAT GGTTGAAGAA 
AAAAAAGGGA AAGCAATTAA AACCATTCAT TTTATCGGCG ATGAAATCTG GAAAATGTAA 

 

Protein sequence

MEIKRRYMLK KKELKELKDE LGNIFDVEKI IPKKAVVEKA VTEEGEIILL DGTPLAMVNN 
GRIFPTLKFL LNMDIENNRV TVDMGAVKFI ANGADIMAPG IVEADENIKE GDIVFVVDVT 
HKKPLSVGEA LMDGKTMVEE KKGKAIKTIH FIGDEIWKM