Gene MmarC6_0848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_0848 
Symbol 
ID5738104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand
Start bp789850 
End bp791001 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content34% 
IMG OID641283323 
Productmajor facilitator transporter 
Protein accessionYP_001548897 
Protein GI159905235 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.589458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGAAA AAATGAACGG TATTTACGTT CTATGGATCA CAATTTTTGT GACGATGCTC 
GGTATTGGTC TAATTTCGCC ACTTCTCGCG ATATTTGCAA AATCGTACGG CCTTTCAAAT
TTTCAGATTG GATTGATTTT TGGTTCATTT GCACTCGTTA GAACAATCTT TCAACTTCCG
GCAGGAACTT TATCTGATAC TTACGGAAAA AAAATATTTT TAGTTGCCGG AACACTTCTT
TACGGGGTAA CCACCATATT TTATAGTTTT GCATCTGGAT TTGCAAGTAT ATTGATTGTT
AGAACCCTTA CCGGGGTTTT TTCTGCATTC GTAAATCCTG TTGCCGGTTC ATACATCGCA
CAAGTTTCCC CTAAATCAAA ACTAGGAGAA TACATGGGAG TATTTAATTC TGCTGTATCT
TTAGGATTTG GTGTAGGGCC ATTACTTGGG GGATTACTTG CAGATATGTA CGGAATCATG
GTTCCCTTTT ATGTATGCGG TATTTTGGGA ATTATTGCTT CAATAATCGC ATATTTTAAA
CTAGAAGATA TTTCTAAATC CCAAGAAAAA CAAAAAATAT CTGGAAAAAA CTTATTTTCT
CTTGAATTTT TAAAAATGAG AAATTTTAGC GCAGCATTTA TCATAAATAT CGCGATAACG
ATTTCAAGGG GCGCACTTCT CGCATATCTT GCAATTTATG CATATGACTA TGGAGTTTCT
GCTTTTAAAA TAGGTTTAAT GCTCGCAGCA ATGAATTTTG TGCTTGCAAT AACTCAGAAA
AAATTTGGAA AAATTTTCGA CGAGAAAGGA AGTAGCATAA TTTTAAAAGG AATATTTATT
GGAAATTTCG GAATGTATGT TCTTGCAATG TCCACTAACT TTATAGAAAT GTTTATTTCA
TTGATTATTG CATCAATCGG GGCTTCAATG AGTACACCTG GAATAAACAC AATCGCAATT
CGCGATATTC CCAATGAAAG AAAAGGCGAA GCAATGGGGC TCTATACTGC AAGTATAAAT
GTAGGAATAT TCGTTGGAGC AGTATTTCTT GGGTATATCT CAGATCTCGT TGGAATTTCA
AACATGTATA AAATAGGGGC AGTATTCTCA TTTTTAATAA GTTATATTGC ATATATTGCG
ATAAAAAAAT AA
 
Protein sequence
MQEKMNGIYV LWITIFVTML GIGLISPLLA IFAKSYGLSN FQIGLIFGSF ALVRTIFQLP 
AGTLSDTYGK KIFLVAGTLL YGVTTIFYSF ASGFASILIV RTLTGVFSAF VNPVAGSYIA
QVSPKSKLGE YMGVFNSAVS LGFGVGPLLG GLLADMYGIM VPFYVCGILG IIASIIAYFK
LEDISKSQEK QKISGKNLFS LEFLKMRNFS AAFIINIAIT ISRGALLAYL AIYAYDYGVS
AFKIGLMLAA MNFVLAITQK KFGKIFDEKG SSIILKGIFI GNFGMYVLAM STNFIEMFIS
LIIASIGASM STPGINTIAI RDIPNERKGE AMGLYTASIN VGIFVGAVFL GYISDLVGIS
NMYKIGAVFS FLISYIAYIA IKK