| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0756 |
|---|
| Symbol | cobN |
|---|
| ID | 5738224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | - |
|---|
| Start bp | 693815 |
|---|
| End bp | 700321 |
|---|
| Gene Length | 6507 bp |
|---|
| Protein Length | 2168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641283222 |
|---|
| Product | cobaltochelatase subunit CobN |
|---|
| Protein accession | YP_001548805 |
|---|
| Protein GI | 159905143 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTTTA AAAATATATT TTTGATATTA CTAAGCATGC TGCTGTTATC ATCCCTTACT
GGAGTTTCAG CAGAAGAAAT TGAATATAAA TTCATTTCAA ACACAACAAG TGATGAAAGC
GGTAATTTTG TCTTTGATGA TGTTCAAAAC GGAAATTACA CCCTTTCCGG AGTAGTTTGG
AGTTCAAAAG GATACTGGCT TGCAAATGTC CAAGACGTGA CCATTGAAAA CGGTACACCT
GTTGAAAACC TTACTGTAAA GGTAACTCAC GACGAAACCA TTGATTCAGA AGCTATACTA
AGACTGCTTA ACAGAACAAC GATATCTGGA GCAACAAGTA CTGCAATGGG ATCAAAAGCT
GGAGTAACAC TAGTTCTCAC GGATAAAGAC GGAGAATTTA TTTCAAACAC AACAAGTGAT
GAAAGCGGTA ATTTTGTCTT TGATGATGTT CAAAACGGAA ATTACACCCT TTCCGGAGTA
GTTTGGAGTT CAAAAGGATA CTGGCTTGCA AATGTCCAAG AAGTAACCAT TGAAAACGGT
ACTCCTCTTG AAAATCTGAC TGTAAAGGTA ACTCACGACG AAACCATTGA TTCAGAAGCT
ATACTAAGAC TGCTTAACAG AACAACGATA TCTGGAGCAA CAAGTACTGC AATGGGATCA
AAAGCTGGAG TAACACTAGT TCTCACGGAT AAAGACGGAG AATTCATTTC AAACACAACA
AGTGATGAAA GCGGTAATTT TGTCTTTGAC GACGTTCAAA ACGGAAATTA CACCCTTTCC
GGAGTAGTTT GGAGTTCAAA AGGATACTGG CTTGCAAATG TCCAAGAAGT AACCATTGAA
AACGGTACTC CTCTTGAAAA TCTGACTGTA AAGGTAACTC ACGACGAAAC CATTGATTCA
GAAGCTATAC TAAGACTGCT TAACAGAACA ACGATATCTG GAGCAACAAG TACTGCAATG
GGATCAAAAG CTGGAGTAAC ACTAGTTCTC ACGGATAAAG ACGGAGAATT CATTTCAAAC
ACAACAAGTG ATGAAAGCGG TAATTTTGTC TTTGACGACG TTCAAAACGG AAATTACACC
CTTTCCGGAG TAGTTTGGAG TTCAAAAGGA TACTGGCTTG CAAATGTCCA AGAAGTAACC
ATTGAAAACG GTACTCCTCT TGAAAATCTG ACTGTAAAGG TAACTCACGA CGAAACCATT
GATTCAGAAG CTATACTAAG ACTGCTTAAC AGAACAACGA TATCTGGAGC AACAAGTACT
GCAATGGGAT CAAAAGCGGG AGTAACACTA GTTCTCACGA AAAAAATAAT TGTGGATACA
GCAGATGAAG AAACTGAATT CGTAGCTGAA ACGTGGTATA AATTCATTTC AAACACAACA
AGTGATGAAA GCGGTAATTT TGTCTTTGAC GACGTTCAAA ACGGAAATTA CACCCTTTCC
GGAGTAGTTT GGAGTTCAAA AGGATACTGG CTTGCAAATG TCCAAGAAGT AACCATTGAA
AACGGTACTC CTCTTGAAAA TCTGACTGTA AAGGTAACTC ACGACGAAAC CATTGATTCA
GAAGCTATAC TAAGACTGCT TAACAGAACA ACGATATCTG GAGCAACAAG TACTGCAATG
GGATCAAAAG CTGGAGTAAC ACTAGTTCTC ACGGATAAAG ACGGAGAATT CATTTCAAAC
ACAACAAGTG ATGAAAGCGG TAATTTTGTC TTTGACGACG TTCAAAACGG AAATTACACC
CTTTCCGGAG TAGTTTGGAG TTCAAAAGGA TACTGGCTTG CAAATGTCCA AGACGTGACC
ATTGAAAACG GTACACCTGT TGAAAACCTT ACTGTAAAGG TAACTCACGA CGAAACCATT
GATTCAGAAG CTATACTAAG ACTGCTTAAC AGAACAACGA TATCTGGAGC AACAAGTACT
GCAATGGGAT CAAAAGCTGG AGTAACACTA GTTCTCACGG ATAAAGACGG AGAATTTATT
TCAAACACAA CAAGTGATGA AAGCGGTAAT TTTGTCTTTG ATGATGTTCA AAACGGAAAT
TACACCCTTT CCGGAGTAGT TTGGAGTTCA AAAGGATACT GGCTTGCAAA TGTCCAAGAA
GTAACCATTG AAAACGGTAC TCCTCTTGAA AATCTGACTG TAAAGGTAAC TCACGACGAA
ACCATTGATT CAGAAGCTAT ACTAAGACTG CTTAACAGAA CAACGATATC TGGAGCAACA
AGTACTGCAA TGGGATCAAA AGCGGGAGTA ACACTAGTTC TCACGAAAAA AATGGTATCT
TATGTTCCCG GAGAGGTTTC AAAACTTAAT ACTGCAATAA TAACTGGATA CAGCAATTAT
GAAAAACAGC TTTCTATATC AACGAATAGA ATAAATTCCA ATTCTAACCT AAATATTGTA
GCTTCATACT ACACAACTTC GGATTTATCC GGAGATATCG ATCTCAGTCA GATGGATATC
ATCTATATAG TAATGGTAAC TCAGAGTGCC GAAACATTCG AAGATGAAGT ACAAAAAGCA
ATAGATAATG GGGCTGTTGT AATCGGTTCC AATACGTATT TACCTGAAAG TAACTACTCA
ATTCCCGAAG AACATGCAGA TGTTGCAGAG TTTAAAAAAT ATCTTTCAGA ATACTGGTCT
GGAGGGGCTT CAGACGATGA AAATTTCGAT AATTTAATTT TTTATTTGGC AAGGGAATAT
TATAACCGTA CAGACCTTAC GGTAAAAGAG CCAACTGGTC TTCAAAGGGC GATATATCAC
CCAAACATGA CATCAACAGT GACTGAATTT TTCACAGGCG ATGCTGAAGA ATATTTTACA
TGGTATTCAA ACCGGACTGA CGGACATGCA TTTGATGAAA ATGCACCAAC AGTTGGAATC
ACGTTTTATA CCTCATACTA TCCTGATGAT ATGGATCCAA TTAACAAATT AATAGCAGGA
TTTGAATCAA GGGGCATAAA TGTTATTGCC TGTCACGGTG ATGCAGACAA CCAGTTAGAC
GATTTCTTAA ATTACAACAA TGAAACAAAA GTAGATGCAG TAATTTCATT CATGTATCGT
GGGAATTACT TTGATTTGGC AGAACTTGGA GTTCCTGTTA TTGATGGAGT ATTAAATGGA
TATATGAATA CAAGCGAATG GGTAGAAACG AGCAATCCTT TACCGGTTGC AAACATGCTT
AGAATTTATC GGCCTGAATC TGAAGGTCTT ATTGATCCTA TAATGATAGG CGCTACTGAG
TCCCTTTTTG AAGACAACAT GACTATTTCG AAATATATTG GTCATGATAC TCAGATCGAA
TGGCTTATTA ACCGAACGAT CGCACAGTGC AATCTTGGAA TCGAGCCTGA AAGTGAAAAA
AAGGTTGCAA TAATATACTA TAATCACGAA GGCGGGAAAA ATAACATCGG AGCATCTTAT
CTTGAAGTTG CACCAAGTAT TGTAAATTTA CTAAATGCAA TGGATTCAGA CGGTTACGCT
ATAAATGAAT CAATAATTCC AAATAAAACA GAACTTGTGG ACTTAATGCT CCTTCAAGGT
AGAAATATCG GAAGTTGGGC ACCAGGAGAA CTTGAAAGTA TTGTTGAAAC AGGGGAAGTT
GAACTTATTC CTGAAGAAAC ATATATTTCA TGGTTTAACG AGTTACCTGA AGAAAGACGA
AGTGAAGTTG TAGAAACTTG GGGTGAAGCT CCAGGCGATT TAATGGTTTA TGAAGACACT
AACGGATCAA AATATATCGT TATTCCTAAA ATAAGTATGA GCGATAATGT AATCGTTGCA
CCACAGCCGT CACGTGGTTT GATGGACAGT TACGACACGT TATACCACGA TACAGAGTTA
CCTCCAAATC ACCAGTACAT CGCATTCTAT TTATGGCTCC AAAAAGAGTT TGATGCAGAT
GTCATGGTAA ATATGGGAAG ACACGGTACC GTAGAATGGC TTCCTGGAAA AGAATTCTGC
CTTTTAAGCG ATGAATGGCC TGCTATAATG ACTGGAGATA TCCCTGTAGT TTATCCATAT
GTGATGGATG GAACAGGGGA AGGAATGCAG GCAAAACGAA GGGGAAATGC AATAATAATT
GACCACTTAA TACCCCCAGT AATATCTGCA GGTCTTTATG GTAATTACAG TTTATTGAAC
AGCGAGATTG CTTCCTACCA GACATCTGTT ACCGAATCCG AGTCACTCAA ACAGGCCCAA
TTGGAAGAAA TTGTAAATCT CACTGTGCAG CTTGATCTTG AAGATCGGGT AAACATGAGT
CTTGTACAAA ACGAAAGCAC AATCGACGAC TTTTTGGATG AGCTCGACGA TGTTTTAAGA
GATTTAAGAA CTCTTTCAAT GCCTTACGGT CTCCACGTCC TTGGTGAGGC ACCTGAAGGC
GAAGAACTCG TCGGTATGGT AAATTCAATG CTTGGAAGCA GTTATTATGA AAAAGTAGCA
CTGTATAATA ATTCAGATTC TGCAGCCAAT GATTTATTAA CAAAAGTACT TTTGGAAAAT
GTAACAATTG ATAACGCACA AATGCAAGTG TTAGGAACTA CTTCAGAAGA TATTGAAAAT
GATTTACAGC TTGCAATTAA TTATTCGGCA CTGCTTTTAG AGGCAGACAA TGAAATTGAA
CAGGTTTTAA AAGCCATGAA TGGAGAATAT ATCGAGCCGG GACTTGGTGG AGATCCAATT
TTAAGGCCCG AAACACTTCC ATCAGGCAGT AATTTCTACT CATTTGATGA ACAACTAGTT
CCAACAAAAC AGGCTTGGGA AGAAGGTAAA GCACTCGTAG ACGAGTGGCT TAGTGAATAT
TACAATGAAA ATGGAGAATA TCCAACTAAA GTAGCTTATA TCTTATGGGC CGGAGAATCC
ACACGCCACC AGGGTATAAT GGAAGCACAA ATTCTTTACA TGCTCGGTGT AAAACCCGTA
TGGGATACAA GTAGTGGAAA AGTTACAGAC GTTGAAATAA TAAACAGTTC TGAACTTAAT
CGACCTCGTA TAGACGTTGT TGTACAGATA TCTGGTCTTT ACAGGGACTC ATTCCCTATG
AAAGTTCAAT TGATAGATAA GGCCGTTCGA CTTGCATATG CAGAAGATGA GCCTGAAAAT
TATGTTAGAA TCAACAGCAA TGAATTACAA GATGTATTAA ATGAAACTAT AAAAAATGAA
AGTCTTTCAT TGGATATTGC ACAGTTTAGA ATTTTTGGAC CTGCTGACGG AAATTATGGA
ACAGGAATGG CAAATGCAGT ATCATCAAGT GAAACATGGA ATGATACGGA TGCATTGGCA
GAACTCTACA TAAACAGAAT GAGTTATATC TACGGCCAAA ATATCTGGGG TCAAACGATT
TCTGAATATA TTGAACTACA AACCGGTCAA AACATAGAAA TTAACAATAC CGTCCTATTT
GAAAACAATC TGGATGATAT TGGGGATATT TTCCACAGTA GAAGTTCAAA TACGTACGGA
TCATTGGATA CAAACGATTT CTTCCAGTAT GTGGGGGGAC TGATAAATGC AATAACCTAT
GAATCTGGTG AAGCTCCAAA CGCTTATGTA GTAAATCTCC AGATTGCTGA TGATCAAAAA
ATAGAGACAT TAAAGAATTA TATTGAAAAT GAACTTTATG CAAGATACTA TAATCCACTA
TGGATAACAG GAATGCAGGA AAGTGGTTTT GAAGGCGCAA CAGAAATGGA AAAATTCATT
GAAAACCTCT GGGGATGGGA AGCTCTCACT TCAGGACTTA TTGATGATGA AATGTGGAAT
AAGGCATATG ATACATATGT TGCAGATTCA GAACTTAACG GATGGTTAAA CGAGAATAAT
CCTTATGCAT ACCAATCAAT GACTGCAAGA ATGATGGAAA CAGCGCGTAA AGATTACTGG
AATGCTGATG ATGCAGTCTT AGAAAACCTG GCAAACGAAT TCATTCAATC AGTAGTTGAA
TACGGAGTTA CCTGCTGTCA CCACACCTGT GGAAACTTGG AACTTAATGA TTGGGCAGTG
GCACATTCTT CACTTGATGA AGAAACATTA AAAGAATACG AAAAGCTATA CGAAGAAGCA
ACACACAAAG ATATAGACGT TTCTTCAGAA ACTGAAACTA CAGTTACCGC TTCGAGCTCA
GAACCAGATA CTTACTCAAA AGTGTACTCT GGAAATGAAT CAGTAATCGA AGCATTAAAT
GCAACAAATA CCACAATACC TACAAACACC ACAGTTACTG AAGATGCAGC ACCAAGTGTT
GGTTCTGATG GAGGCAGAAG TAGTTCTGGA AGTTCAAGTT CAACTTCAAG TACAGAATCT
TCTTCATCTT CAACATCAAA AACACAGAAA GCATACGAAG TTACAGTTGC AAACGAACCA
GAAACTTCTG AAACATCTGG AACAACGATT ATCGCAATTG TTGGTGCAAT TGGAATGACG
AGCCTTGTTG GTGTTGGATA CTTTAAGCAA AACCCAGAAG TATTTACAAA TATTATAAAT
GCTCTGAAAC TTTTGAGAAG AAAATAA
|
|---|
| Protein sequence | MRFKNIFLIL LSMLLLSSLT GVSAEEIEYK FISNTTSDES GNFVFDDVQN GNYTLSGVVW
SSKGYWLANV QDVTIENGTP VENLTVKVTH DETIDSEAIL RLLNRTTISG ATSTAMGSKA
GVTLVLTDKD GEFISNTTSD ESGNFVFDDV QNGNYTLSGV VWSSKGYWLA NVQEVTIENG
TPLENLTVKV THDETIDSEA ILRLLNRTTI SGATSTAMGS KAGVTLVLTD KDGEFISNTT
SDESGNFVFD DVQNGNYTLS GVVWSSKGYW LANVQEVTIE NGTPLENLTV KVTHDETIDS
EAILRLLNRT TISGATSTAM GSKAGVTLVL TDKDGEFISN TTSDESGNFV FDDVQNGNYT
LSGVVWSSKG YWLANVQEVT IENGTPLENL TVKVTHDETI DSEAILRLLN RTTISGATST
AMGSKAGVTL VLTKKIIVDT ADEETEFVAE TWYKFISNTT SDESGNFVFD DVQNGNYTLS
GVVWSSKGYW LANVQEVTIE NGTPLENLTV KVTHDETIDS EAILRLLNRT TISGATSTAM
GSKAGVTLVL TDKDGEFISN TTSDESGNFV FDDVQNGNYT LSGVVWSSKG YWLANVQDVT
IENGTPVENL TVKVTHDETI DSEAILRLLN RTTISGATST AMGSKAGVTL VLTDKDGEFI
SNTTSDESGN FVFDDVQNGN YTLSGVVWSS KGYWLANVQE VTIENGTPLE NLTVKVTHDE
TIDSEAILRL LNRTTISGAT STAMGSKAGV TLVLTKKMVS YVPGEVSKLN TAIITGYSNY
EKQLSISTNR INSNSNLNIV ASYYTTSDLS GDIDLSQMDI IYIVMVTQSA ETFEDEVQKA
IDNGAVVIGS NTYLPESNYS IPEEHADVAE FKKYLSEYWS GGASDDENFD NLIFYLAREY
YNRTDLTVKE PTGLQRAIYH PNMTSTVTEF FTGDAEEYFT WYSNRTDGHA FDENAPTVGI
TFYTSYYPDD MDPINKLIAG FESRGINVIA CHGDADNQLD DFLNYNNETK VDAVISFMYR
GNYFDLAELG VPVIDGVLNG YMNTSEWVET SNPLPVANML RIYRPESEGL IDPIMIGATE
SLFEDNMTIS KYIGHDTQIE WLINRTIAQC NLGIEPESEK KVAIIYYNHE GGKNNIGASY
LEVAPSIVNL LNAMDSDGYA INESIIPNKT ELVDLMLLQG RNIGSWAPGE LESIVETGEV
ELIPEETYIS WFNELPEERR SEVVETWGEA PGDLMVYEDT NGSKYIVIPK ISMSDNVIVA
PQPSRGLMDS YDTLYHDTEL PPNHQYIAFY LWLQKEFDAD VMVNMGRHGT VEWLPGKEFC
LLSDEWPAIM TGDIPVVYPY VMDGTGEGMQ AKRRGNAIII DHLIPPVISA GLYGNYSLLN
SEIASYQTSV TESESLKQAQ LEEIVNLTVQ LDLEDRVNMS LVQNESTIDD FLDELDDVLR
DLRTLSMPYG LHVLGEAPEG EELVGMVNSM LGSSYYEKVA LYNNSDSAAN DLLTKVLLEN
VTIDNAQMQV LGTTSEDIEN DLQLAINYSA LLLEADNEIE QVLKAMNGEY IEPGLGGDPI
LRPETLPSGS NFYSFDEQLV PTKQAWEEGK ALVDEWLSEY YNENGEYPTK VAYILWAGES
TRHQGIMEAQ ILYMLGVKPV WDTSSGKVTD VEIINSSELN RPRIDVVVQI SGLYRDSFPM
KVQLIDKAVR LAYAEDEPEN YVRINSNELQ DVLNETIKNE SLSLDIAQFR IFGPADGNYG
TGMANAVSSS ETWNDTDALA ELYINRMSYI YGQNIWGQTI SEYIELQTGQ NIEINNTVLF
ENNLDDIGDI FHSRSSNTYG SLDTNDFFQY VGGLINAITY ESGEAPNAYV VNLQIADDQK
IETLKNYIEN ELYARYYNPL WITGMQESGF EGATEMEKFI ENLWGWEALT SGLIDDEMWN
KAYDTYVADS ELNGWLNENN PYAYQSMTAR MMETARKDYW NADDAVLENL ANEFIQSVVE
YGVTCCHHTC GNLELNDWAV AHSSLDEETL KEYEKLYEEA THKDIDVSSE TETTVTASSS
EPDTYSKVYS GNESVIEALN ATNTTIPTNT TVTEDAAPSV GSDGGRSSSG SSSSTSSTES
SSSSTSKTQK AYEVTVANEP ETSETSGTTI IAIVGAIGMT SLVGVGYFKQ NPEVFTNIIN
ALKLLRRK
|
|---|
| |