| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0678 |
|---|
| Symbol | |
|---|
| ID | 5738995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | - |
|---|
| Start bp | 625534 |
|---|
| End bp | 626538 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641283144 |
|---|
| Product | hydrogenase expression/formation protein HypE |
|---|
| Protein accession | YP_001548727 |
|---|
| Protein GI | 159905065 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0309] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase
[TIGR02124] hydrogenase expression/formation protein HypE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTA CACGGATGCA CGGTGCTGGC GGAACCGTAA TGCAAAAGTT AATTAAGGAA
ACAATACTCG GTAACTTAGA GAATACTAAG ATCGAAGGTG GAATCGGTCT TGAGTCATTA
GACGACGCAT CAACAATACC GCTTGGAGAT AAAGAAATAG TTTTTACTGT TGATGGGCAC
ACGGTACAGC CAATATTTTT CCCGGGCGGG GATATCGGTA GAATTTCCGT TTGTGGAACT
GTAAACGACC TTTCAGTAAT GGGTGCAAAA CCTGTTGCAC TTTCTCTTTC AATCGTTCTT
CCAGAAGGTT TCGATATTGA AAAACTCGAT AAAATAATGA AATCAATAAA TGAGGCCTGT
AAGGAAGCTG GAGTCGCTAT AATTACGGGC GACACAAAAG TTTCAAATGT TGACGATATA
ATCATTTCAT CTGCAGGAAT CGGCCTAGTT GATTCTGGTA AAGCTGTACG GGATTGCGGA
ATGAGGGAAG GAGACGTAAT AATCGTTACA GGAAATATCG GAGAACACGG TCTTACAATA
CTCCTTACAA GAGAAGGTTT TGAATTTGAA TCAGATTTAA AGTCAGACGT AGCTCCAGTA
AATGGAATTG TCCAGAGCGT TTTAAATGCC GGATTTGAAA TTAATGCAAT GAAAGACCCT
ACAAGGGGCG GTCTTGCAGA TTCCTTAAAT GAAATGGCAG AAAAAAGTGA TTTAGGAATA
TTGATTTACG AAGACCAAAT CCCGATAAGT GACGAAGTTC AAGCTATTGG TGAAGCCCTT
GGAATCGACC CTTTAACAGT TGCAAACGAA GGAAAAGTTG TAATGTCGGT CAATGAAAAA
GATTCAGAAA AAATACTTGA AATTTTAAAG GCACATCCTC TCGGAAAAAA CGCCAAAATT
ATTGGAAATG TAACATCTGA ACACAAAGGA GTTTTGATGG AAACAATTGT CGGAAAAAGA
ATTGTTGATA CACCAATGGG CGACCCAATA CCTAGAGTTT GCTAA
|
|---|
| Protein sequence | MNITRMHGAG GTVMQKLIKE TILGNLENTK IEGGIGLESL DDASTIPLGD KEIVFTVDGH
TVQPIFFPGG DIGRISVCGT VNDLSVMGAK PVALSLSIVL PEGFDIEKLD KIMKSINEAC
KEAGVAIITG DTKVSNVDDI IISSAGIGLV DSGKAVRDCG MREGDVIIVT GNIGEHGLTI
LLTREGFEFE SDLKSDVAPV NGIVQSVLNA GFEINAMKDP TRGGLADSLN EMAEKSDLGI
LIYEDQIPIS DEVQAIGEAL GIDPLTVANE GKVVMSVNEK DSEKILEILK AHPLGKNAKI
IGNVTSEHKG VLMETIVGKR IVDTPMGDPI PRVC
|
|---|
| |