| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0657 |
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| Symbol | |
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| ID | 5738946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | + |
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| Start bp | 603757 |
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| End bp | 604845 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641283123 |
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| Product | NMD3 family protein |
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| Protein accession | YP_001548706 |
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| Protein GI | 159905044 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1499] NMD protein affecting ribosome stability and mRNA decay |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.451863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGAT TCTGCTACCG CTGCGGTCAT GAAGGCGAAC TTCTAGATGG CCTCTGTAAA
ATCTGCTACA CCCACATGAA TCCACTTATT GAACTCGATA ACGAGATCCA CGTTGAAGTC
TGCCACATGT GCGGGTCATA CAAGAGAAAA CTCTGGCAAG ACCCTCAAAA AAAGGAAACA
TACGAGGTAA TGGAAGAAAT TGCATATTTT GGAGTTAAAG ATAATTTAAA AAAGGCAAAT
AAAAGTATTG ATGTAGAGAT AATCCCACAA GAACCAAGAC AGCTTCCAGG AGGAAAAAGA
TCCCGTGTAG AAATTCCAGT TGTTGTTTTT GCAGAAGGAA GACTTGTTGG GGAAGATAAC
GATAGAGATG AAGAAAGACA CATTACAGTT TATCTTGATA TGGTGCAGTG CCCAAGATGT
TCGAGATGTA TGTCAAACTA CTACGAAGGA ACCCTGCAAG TTAGGGCAAT GAACCGGTTT
TTAAATGACA AAGAAAGGTT AGAATTGGAT GACTTTGTTA GAGATGAAGC TGAAAAACGA
CTTAATAAAG ACAGGATGGC ATTTATCTCA AAATATATTC CTCAAAAAGA AGGATTGGAC
TATCAGATGG GTTCAATGGG TGCAATAAGA AACATTGCAT CAGCGATAAA AGCAAAATAC
GGTGGAAAAT CGATTGAAAC TGCAAAACTC GTCGGAGTAG ATAAAGATAC TGGAAAAGAC
CAGTACAGAA TTACGGTTGC AGTTCGGATT CCAGAATTTA AACTTGGAGA TATTTTAGAA
TATAGCGAAA AACATTATGT TGTTTCTTCT TTGAATGAAG CGAGAGTATA TTTAGAACCT
GTTGAACTAG GGGATAAAAT TTCACTTGCA TGGAATGAAA TCGATAAATC TGCAAAATTA
ATTAAAAAAG GAGAAGATTG CGAAACTGCA ACGGTAATTT CGATTACTCC TGACACGATA
ACTGCGATGG ACGATTCAAA TTACGAGATA TATGAATACA ATAATTCGAT TGAAAATGTA
AAAGAAGGGG ATAAATTAAG AATATTTAAA AACGAAGTAA TTAACAGGAT TTTAGAAATT
ATAGAATAA
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| Protein sequence | MKGFCYRCGH EGELLDGLCK ICYTHMNPLI ELDNEIHVEV CHMCGSYKRK LWQDPQKKET
YEVMEEIAYF GVKDNLKKAN KSIDVEIIPQ EPRQLPGGKR SRVEIPVVVF AEGRLVGEDN
DRDEERHITV YLDMVQCPRC SRCMSNYYEG TLQVRAMNRF LNDKERLELD DFVRDEAEKR
LNKDRMAFIS KYIPQKEGLD YQMGSMGAIR NIASAIKAKY GGKSIETAKL VGVDKDTGKD
QYRITVAVRI PEFKLGDILE YSEKHYVVSS LNEARVYLEP VELGDKISLA WNEIDKSAKL
IKKGEDCETA TVISITPDTI TAMDDSNYEI YEYNNSIENV KEGDKLRIFK NEVINRILEI
IE
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