Gene MmarC6_0592 details

Gene Information

• Locus tag: MmarC6_0592
• ID: 5738830
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C6
• Kingdom: Archaea
• Replicon accession: NC_009975
• Strand: -
• Start bp: 543117
• End bp: 543680
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 641283055
• Product: dTDP-4-dehydrorhamnose 3,5-epimerase
• Protein accession: YP_001548641
• Protein GI: 159904979
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
• TIGRFAM ID: [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 0.430103
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCATTTA TCTTTAAAAA TTTAGAAATT CCCGAAGTAA TTTTAATCGA ACCAAAAGTT 
TTTCCTGATG AAAGAGGATT TTTTTTAGAG TCTTATAAAT CTAGCGATTT TTTTGATGCA 
GGAATCACTG AAAACTTTGT TCAGGATAAT CATTCAAAAT CAAAATATGG TGTTTTACGA 
GGATTACATT TTCAGAAAAA TCCAAAAGCA CAGGGAAAAC TTGTTAGGTG TATAACTGGG 
GAAATTTTTG ATGTTGCAGT TGATTTAAGA AAAAATTCTC CAAATTATGG AAAATGGGTT 
GGAGAAATAC TTTCCGAAGA AAACAAAAAA ATGTTATACA TTCCAAAAGG ATTTGCACAT 
GGATTTTGCG TGTTAAGTTC AGATGCAGAA ATAATTTATA AATGTACTGA AGAATATGCT 
CCAGAGTGTG ATGCAGGAAT AAAATGGAAT GACAATGCAA TTGAAATTGA TTGGCCAGTA 
GTGGATCCAA TAATTTCGGA AAAAGATTCA TTGTTACCAA ATTTATTAGA TTCAGATATA 
AATTTTGTGT GTGGTGAAGA ATAA 

 

Protein sequence

MPFIFKNLEI PEVILIEPKV FPDERGFFLE SYKSSDFFDA GITENFVQDN HSKSKYGVLR 
GLHFQKNPKA QGKLVRCITG EIFDVAVDLR KNSPNYGKWV GEILSEENKK MLYIPKGFAH 
GFCVLSSDAE IIYKCTEEYA PECDAGIKWN DNAIEIDWPV VDPIISEKDS LLPNLLDSDI 
NFVCGEE