Gene MmarC6_0541 details

Gene Information

• Locus tag: MmarC6_0541
• ID: 5738629
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C6
• Kingdom: Archaea
• Replicon accession: NC_009975
• Strand: -
• Start bp: 500243
• End bp: 502273
• Gene Length: 2031 bp
• Protein Length: 676 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 641283004
• Product: hypothetical protein
• Protein accession: YP_001548590
• Protein GI: 159904928

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.316671
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAATAAAA AACTAACACT TCTTTTAATT TTTTGTGTAA TCGGTTCTAT GTGTCCTGCA 
AGTGCGTTTG ATAATGTTTC AAATGGTACG TGGTACGGCC CTGCACTTAA TTGGATAATT 
GATATTGTAA ATGTTGGAGA TGTAAGCTCG TTCTTTGATG ATTCAGTTAC TGATGATGAA 
TACGAAGAAG ATGATTCAGC TGATACTTCA ACAATGAATC AATCTGAAGC TGAAGACCAA 
GCAGTTACTA ATATACTTGG AGATAAGCAA ACTGCAACTG AAGACATGAT GGAATCTATT 
CAATATATTC GAGAAGCTGT TGCTCAGGAA CCTGAAACCT GTTCTTTTTC AGGGGATAAA 
CAGGGTGGTT TAACCCTTTC ATCTTTTAAA GTTGCAAATA ATATTCACGG TGCTTCAGTA 
TTTCCAGTTC AGATTACTGT AACAACTCCG AGAATTTCAA CAGATTTGGA AGATGTAGAT 
AGAACAACAG GTGAAGTTGA TGGAGAAAGT TATTCTTTAG ATATTAAAGG ATATACAAAC 
ATTACAAGGG TTACCTTTCA GGTAGTTCAG GGTGATGTTG TGATTTCTCA GTATGTATTA 
GATGATTTGA ACGTTTCTTC AGAATCGTCT TCACATACAT TTACAGGGAT ATTAAAAGCC 
CCTGATGACA ATTATCAAGA AATTTCTTCA ATTGTTGATG GTGGACTCGT TACAGTTTCT 
CAGATGAATT CAATTTTAAA TGCTGAAGTT GAAGACTTTG AAGTGAAAGT AATAATCGAC 
CATAAAATCT ATATTTGGGA AGAAAACGTT GAACACGCTA CGTGGTACAT GACTGAACAT 
GAAGATACTG AAGAAAAACC CGATAAATAT CCTGAAGACC CGACTGATTC ATATGGCTAC 
GACTCGATTT ATACAACGAG AAACGCTGAT GATTTTATAT ATGTCGGTCA GCACCCTGTA 
AACGGTTATG AATCCGGTGT AAGTGCCGAA TTTGAAGAAG TATTTGGTAG TGAATTATTC 
CCATTCCAAA CGGCTTCAAA TGGTGCGGTA AATAACTTTA TAGTTCCATT GTATGCTACA 
ATGATTCACG AATTCGAAAA CCCTGCAAGG TTCAGGTTTA ATATTTTGAA TAATCCTAAA 
AACTTGTTAC CGTATTCAAA CGATTCAAAA ATTCAAAATG TGAAATTTAG ACTTGTTGCG 
ATAAATTACC ACATGGACGG AACTTGCAGT TTATCTTTTG ATTCAAGGTC TTCTTTACCT 
GATATCGATG AAGATGGACT TGTTGATAAG GTAATTCCAT ATACTGCGGA TAACGACACG 
GTTGAAATCT ATACTTATTT GCTTGTTACA GGTCGGATTT ATGATACGGA AGTAGGTCAG 
TCATATCCAG TATGGTATAT TGCAAGACCT TCGATTTCAG TTAGAAGTAA TTACGAATCA 
ATTACTGCTG AACACTCAGA ATTGATTGAT GCCTTTTTAA CTGATGATAT TATTACATGG 
TCTGAAAGTG ATACAATAGA AGAATTCTTT GAGTCAGATA TTGCCACACT TCACGATAAA 
AAAAATGAAG CTGAAGAATG GCAAGATAAA TGTGAACTTA AAGGTACAAC TCTTGGAGTT 
AAATATTCAA AACTTGCAGC AGAAAAATAT CAAAATGCAA TTAGTTCGCT TACTGGTGTA 
GATACTTCAG ATGTTTCAGA AGTTAGAACT GCAAAAACAA ATGCTTATCT TTACGAAGTT 
GAAGCAAACG ACTATCTCGA AGCTGCAAAA AAATGTTATT ACGGTGCTGA AGATACCGCT 
GAAATACTTG TTTCAGAATA CGAAGAAGAA AACGATGTTA CTTTTGGACT TGTTTCTTTG 
TTCGCTTCCG ATTTCTTAGA TGAAATAAAC GATTACCTGT CATTTATTCC ATACTCTGAA 
GAAATAAATA CTTCAGTTCC TGGGGGAATG CTTACAGTTA TTGTTTTACT TTGTGGTGCA 
GTAGTTGTAT TTAGACCTAA ATCTTCAGGA TACAAAAGAA GATGGAAATA A 

 

Protein sequence

MNKKLTLLLI FCVIGSMCPA SAFDNVSNGT WYGPALNWII DIVNVGDVSS FFDDSVTDDE 
YEEDDSADTS TMNQSEAEDQ AVTNILGDKQ TATEDMMESI QYIREAVAQE PETCSFSGDK 
QGGLTLSSFK VANNIHGASV FPVQITVTTP RISTDLEDVD RTTGEVDGES YSLDIKGYTN 
ITRVTFQVVQ GDVVISQYVL DDLNVSSESS SHTFTGILKA PDDNYQEISS IVDGGLVTVS 
QMNSILNAEV EDFEVKVIID HKIYIWEENV EHATWYMTEH EDTEEKPDKY PEDPTDSYGY 
DSIYTTRNAD DFIYVGQHPV NGYESGVSAE FEEVFGSELF PFQTASNGAV NNFIVPLYAT 
MIHEFENPAR FRFNILNNPK NLLPYSNDSK IQNVKFRLVA INYHMDGTCS LSFDSRSSLP 
DIDEDGLVDK VIPYTADNDT VEIYTYLLVT GRIYDTEVGQ SYPVWYIARP SISVRSNYES 
ITAEHSELID AFLTDDIITW SESDTIEEFF ESDIATLHDK KNEAEEWQDK CELKGTTLGV 
KYSKLAAEKY QNAISSLTGV DTSDVSEVRT AKTNAYLYEV EANDYLEAAK KCYYGAEDTA 
EILVSEYEEE NDVTFGLVSL FASDFLDEIN DYLSFIPYSE EINTSVPGGM LTVIVLLCGA 
VVVFRPKSSG YKRRWK