| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0371 |
|---|
| Symbol | |
|---|
| ID | 5737893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | + |
|---|
| Start bp | 332022 |
|---|
| End bp | 333266 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641282835 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001548424 |
|---|
| Protein GI | 159904762 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCCT TAAAATTATT TAATATGGCA TCTAAAATGG TAAAATCCAG CAAATTACGT
AGCTGGATCA CCATTTTGGG TATCGTTATT GGAATTGCAT CAGTTATAGC GATCATATCT
GCTGGAGACT ATCTTTCAAC TTCAGTTAGC AATCAACTTG ACGATATGGT AAGTAATGAA
ATAACACTTA CTGCATCAGC CGCACAGGGT AGTGATGACG ATGATCCCGA ACTAACAGAC
ATGGATGTAC TGATTCTAAA CGGAATATCG GATATAGAAT ACGTAGATGT GCGGGTTTCG
ACCAAAAATG AAATAAGTTT TGCAGGAGGT CATGAAACTG CAACAATTAC TGGAGTCGAC
CCTGCAGTGT GGTCGCAGAT GACTGATGAA GAATTATATG CAGGAAGGCT TTTACAGGCC
AGTGACTCAA ATGCAGTTGT TATTTCATAC TATACTGCAA CAGAAGCGTT TGATAGAGAA
ATTGGAATAA ACCAAGTAAT AAGCATTGGT AATAAACAGT TCAAAGTCGT TGGAATACTT
GAAGAAGATG AAACACAGGG ATTTGGTCAG ATGGGCGGTA TGAGCTCAAA TACAGTTTAC
ATGCCATATG AAGCAGTATA TACTTTGGAA TTAGATGAAG ATGCGTCATA TTCAATTCAA
GAAAAAGAAG AAGGAGTATA TGACGAAATA ATCTTTACAT TATACGAAGA TGTAAACCAA
ACTACCGCAC TTGAAAACAT TGAAGAAAAA TTGATGATGT CAAGACACGT TAATGAAAAA
ACAATTGACT TTTCATTAAG AACTCCGAAT ACTCCAGAAG GCCCTGAAGA GATAATTTCA
ATGCTTACAA CGTTCCTTTC AGCCATTGCA GGAATTTCAC TGATTGTTGG TGTTACAGGT
ATTTCAAATA CCATGTTTAC AACAGTTCTT GAAAAAACCA GAGAAATTGG AATCATGAAA
GCAATAGGTG CTAAAAACAA AGACATAATG CTGCTGTTTG TCTTTAACTC TGCGATTATT
GGACTTGTTG GTGGATTCTT GGGACTTGTA CTCGGTACAC TGATTTCCCA AATCATAGTC
TGGTTTATTG CGTCGAGTAT GGATAGCAGT TACCAGTTTG TATTGAGCAT TAAATCTGTT
GTAATTGCAA TTGGATGTTC ACTTACAGCA GGAATTATTG CAGGAATCAT TCCAGCATAC
AATGCTTCAA AATTAAAGCC TGTTGAAGCT TTAAGAAGCG ACTAA
|
|---|
| Protein sequence | MKPLKLFNMA SKMVKSSKLR SWITILGIVI GIASVIAIIS AGDYLSTSVS NQLDDMVSNE
ITLTASAAQG SDDDDPELTD MDVLILNGIS DIEYVDVRVS TKNEISFAGG HETATITGVD
PAVWSQMTDE ELYAGRLLQA SDSNAVVISY YTATEAFDRE IGINQVISIG NKQFKVVGIL
EEDETQGFGQ MGGMSSNTVY MPYEAVYTLE LDEDASYSIQ EKEEGVYDEI IFTLYEDVNQ
TTALENIEEK LMMSRHVNEK TIDFSLRTPN TPEGPEEIIS MLTTFLSAIA GISLIVGVTG
ISNTMFTTVL EKTREIGIMK AIGAKNKDIM LLFVFNSAII GLVGGFLGLV LGTLISQIIV
WFIASSMDSS YQFVLSIKSV VIAIGCSLTA GIIAGIIPAY NASKLKPVEA LRSD
|
|---|
| |