Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0309 |
Symbol | valS |
ID | 5739009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 280473 |
End bp | 283133 |
Gene Length | 2661 bp |
Protein Length | 886 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641282773 |
Product | valyl-tRNA synthetase |
Protein accession | YP_001548362 |
Protein GI | 159904700 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0525] Valyl-tRNA synthetase |
TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATAA AAGAAGAATA TTCAATAGAA CTTGAAAATA AAGTTCAAGA AAAATGGGAA AACGAAAAAA CATTCAAATT CTTGGAAGAT GATAAAAGGC CACCATATAT TATAGATACT CCACCGCCAT ATCCAACAGG CAGAATGCAC CTTGGACACG GGCTTAACTG GACATATATG GACATTATTG CGAGATTTAA AAGAATGAAT GGATACGATG TGCTTTTCCC CCAAGGCTGG GACTGCCACG GACTTCCAAC CGAAGTTAAA GTCGAAGAAT TAAACAATAT CACAAAGTCT GACATTGACA GACACGAATT TAGAAGACTC TGTGTAGAAT TGACTGATGA AAACGTAGAA AAAATGAGGG GCCAGGTTAA ATCACTTGGA ATCTCAATTG ACTGGGATAG AGAATATATT ACAATGAATC CAGACTACGT TAGAAAATCA CAGACTGCAT TTTTGAAAAT GTACGAAAAA GGGTTAATTT ACAGGGGAAA ACACCCGGTA AACTGGTGCC CAAGATGTGA AACTGCTATC GCATTTGCAG AAGTAGAATA TCAAGAAAGA ACTTCAAAAT TAAACTACAT AAAATTCCCA TATGCAGAAA ATGCTGAAAA ATATCTTGAA ATTGCAACTT CAAGACCAGA ATTAATGGCT GCTTGTGTTG GAATCGTTGT ACATCCTGAG GATGAACGAT ACAGCGACGT TATTGGAAAA ACCGTTAGAG TTCCATTATT TAATCAGGAA GTTACAGTTT ACCCTGATTC CGATGTAGAA CAAGATTTTG GTACTGGAGT TGTAATGGTT TGTACTTTTG GTGACAAAAC CGACGTTACA TGGGTAAACA GGCACAAATT AGAAGTTAAA AAAGCAATTA ATGAAAAAGG ACAATTAACA GAAATCTGCG GAAAATATGC AGGTAAAAAA TCAGACGATG CAAGAAAAGA GATTATTTCC GATTTAATTT CTGAAGACTA CATGATAAAA CAAGACCCAC TTGAACAGAA CGTTGGTTCA TGCTGGAGAT GTAAAACCCC TATCGAGATC ATTGTTGGAG ACCAGTGGTT TGTAAACGTT ACAAAGTTAT TAAAAGAAGT GGAAAACGCT GCAAACGAAA TTTCATGGGT TCCAGAACAT ATGAAAGCAA GACTTTTAAA ATGGGTCGAA GATATGGGCT GGGACTGGTG TATTTCAAGA CAGAGATTGT TTGCAACCCC AATTCCGGTA TGGTACTGTA AAGACTGTGG GGAAATCATT GTAGCTAAAC CTGAAGATTT ACCAATAGAT CCAACAAAAG AAAGCCCGTA CACATGTAAA TGTGGAAACT CAAAGCTTGT TGCTGAAACC GATGTTTTAG ACACCTGGAT GGATTCATCA ATTACCCCAC TCGTTATAGC AGGATGGCTT GAAGATGATG AATTCTTCAA AAAACACTAC CCTGTTCAAT TAAGACCTCA AGGCCACGAT ATCATCAGAA CCTGGGCTTT TTACACGATT GTTAGATCAC TTGCAATCAC CGGCGAAAAA CCATGGGATG AAATCGTAAT TAACGGAATG GTTTTCGGTG AAGACGGATT TAAGATGAGT AAAAGTAGGG GAAACGTTGT TGAACCTGGA GAAATTACCA AAACTTACGG TGCAGACGCT TTAAGGTTAT GGGCTTCAAA CAGCACCATT GGAAAGGACG TTCCATTCGC CTGGAAAGAA GTAGAATACG GTGGAAGGTT TTTGCGAAAA ATATGGAATG CATGTAAATT TGCAAAAATG AACATTTCTG ATGAAGTAAT TTCTGAATTG AAATCTTTAA AATCCATTGA AATTGAAAAT CCTGTTGATT TATGGATTTT GAGTAAATTA AATGATTTAA TTTCAAAAGT TTCAAAAGAT CTTGGAAATT ACAAGATAAA CACAGTTGTA GAAATTCAAA AATTCTTATG GCATGAATTC TGTGATAACT ACATCGAAAT GGTAAAACAC AGGCTTTATA CCAAAGAAGA ATCTGAAAGC GCTCAAAAAG AAAAATTAAT GGCACAATAC ACGCTGTATA AGGTAATTAC AGAATCCGTA AAATTACTTA CGCCATTTAC GCCACACTTT GCAGAAATTG TCGGACAAAT CTACGAAATT GATGATTTGC ATATCTCATG GCCAGTTGCA GATGAAAGCT TGATAAGTTT AGAAAACGAA TTTGTCGGAG AAGTTGCAAA AAATACGGTT GCATCGATTA GAAGATACAA ATCAAACAAA GGAATGCCAC TTAATGCAGA ATTAAACAAA GTTGAAATGT ATGTAAGCGA TGAAAAAGAT TTCAATGCTC TTTCAAAAGC TTCAGAAGAT ATTGAAAAGT CTTTGAAAAT TAAAGAACTT GAACTAAATC TTGGAAAACC ACTCCTCGAA CAAAAAATTG CAGAAGTGAC TCCGAACAAG TCCAAAATCG GTCCAGAATT TAAAAAAGAT GCTGGAAAAG TAACTGCATT TATCAAAGAA GCTGATGCAG AAACAATTGA AAAAATCCTT TCGGAAGGAA TTGAAACCGA ATTTGGTGCT TTAAACAAAG AACACATCAA AGAAGTAAAA AGAGCGATAT ATAACAAAGG AGAAATTGTT GAAACTGCAG ATATCGACAG TTTAATCGAT ACTATTGCAA TAATTCAATA A
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Protein sequence | MEIKEEYSIE LENKVQEKWE NEKTFKFLED DKRPPYIIDT PPPYPTGRMH LGHGLNWTYM DIIARFKRMN GYDVLFPQGW DCHGLPTEVK VEELNNITKS DIDRHEFRRL CVELTDENVE KMRGQVKSLG ISIDWDREYI TMNPDYVRKS QTAFLKMYEK GLIYRGKHPV NWCPRCETAI AFAEVEYQER TSKLNYIKFP YAENAEKYLE IATSRPELMA ACVGIVVHPE DERYSDVIGK TVRVPLFNQE VTVYPDSDVE QDFGTGVVMV CTFGDKTDVT WVNRHKLEVK KAINEKGQLT EICGKYAGKK SDDARKEIIS DLISEDYMIK QDPLEQNVGS CWRCKTPIEI IVGDQWFVNV TKLLKEVENA ANEISWVPEH MKARLLKWVE DMGWDWCISR QRLFATPIPV WYCKDCGEII VAKPEDLPID PTKESPYTCK CGNSKLVAET DVLDTWMDSS ITPLVIAGWL EDDEFFKKHY PVQLRPQGHD IIRTWAFYTI VRSLAITGEK PWDEIVINGM VFGEDGFKMS KSRGNVVEPG EITKTYGADA LRLWASNSTI GKDVPFAWKE VEYGGRFLRK IWNACKFAKM NISDEVISEL KSLKSIEIEN PVDLWILSKL NDLISKVSKD LGNYKINTVV EIQKFLWHEF CDNYIEMVKH RLYTKEESES AQKEKLMAQY TLYKVITESV KLLTPFTPHF AEIVGQIYEI DDLHISWPVA DESLISLENE FVGEVAKNTV ASIRRYKSNK GMPLNAELNK VEMYVSDEKD FNALSKASED IEKSLKIKEL ELNLGKPLLE QKIAEVTPNK SKIGPEFKKD AGKVTAFIKE ADAETIEKIL SEGIETEFGA LNKEHIKEVK RAIYNKGEIV ETADIDSLID TIAIIQ
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