| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0296 |
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| Symbol | |
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| ID | 5738970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | - |
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| Start bp | 268897 |
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| End bp | 270351 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641282760 |
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| Product | C/D box methylation guide ribonucleoprotein complex aNOP56 subunit |
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| Protein accession | YP_001548349 |
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| Protein GI | 159904687 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1498] Protein implicated in ribosomal biogenesis, Nop56p homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATTCA TTGCCTTTGC ACCATTTGGA GCATTTGCAC TTGAAGCGAA CTCGAAAAAC
GGCGAATATT CATTAGACGA TATCAAATAT TACAAAATAT TTGAAAACGA GGATATTCCA
AAAGTAATGT ATGAATTGAG ACAGGCGAAT TTTGAAATAA TCGATGAATT GAAAAACGAA
TGGGAAATTG GGGAAGAAAG CGTTAGTTTT GAATACACGT CTTCCAAAAA TCCGCTCGGA
GAACTTATTC GAGATAATTT GTACGAATTA GGTCAAAAAT ACGAAGTATT TGAAAGTGAA
ACTGATTTTG TTTCAAAAAT GAATGCTTGG GCAACCTCTT TCACAAAATC GATGATGAAA
AAATCATCAG AACAGAAAGA TAAATTGATA GTTCAGACGG TAAATGCTCT TGATAACCTT
GATGAAACCC TAAATTTGTT TTCAGAAAGA CTTAGAGAAT GGTATTCACT TTATTTTCCA
GAAATGGATA ATTTGATCAA GAAACACGAT ATTTACGTAG GACTGGTTTC CGAATACGGG
GATAGGGAAG AGTATACTAG AACAAAACTC AAAAAAACAA TGCCTTCAAA TGTTGCAAGA
ACCATTTCAC TTGCTGCAAA AGAATCAATG GGTGCAGATG TATCCGAATT TGATTTGGAA
ATCATGAAAA ACCTTGCAAA TGAAATAAAA AGTATGTATG AATACAGAGA AAAATTGCAA
GAATATCTTG AAACTTCAAT GAACGAGGTT GCTCCAAACT TGACGAAAGT TGCAGGTGCA
TCACTTGGTG CAAGATTGAT AAGCCTTGCG GGTGGAATTG AAAGACTTTT AAGACTCCCT
GCATCAACAA TACAAGTTAT CGGTGCAGAA AAAGCGTTAT TCGCACACTT AAGGGAAAGA
GCATTACCTC CAAAACACGG GGTTATATTC CAGCATCCTT TGATACAGGG AAGTCCCTGG
TGGATACACG GAAAGATTGC AAGAGCAATT TCCTGTAAAA TTTCAATTGC GATAAGGGCA
GATGCTTTTG GAAATGATAT TTCTGACATG TTGATTGAAG ACATGAACAA AAAAGTAGCT
GAAATAAAAG AAAAATTCCC TGAACCAATG AGAAAAAGAA GGCCAAGGCC TGATACGAGA
AGTTTTGGTA ATAAAGGCGG CCAGGATAGG GATAGAAGGT CACAGGGTGA CAGAAAACCA
TTCGATAAAA AAGGCGACTC CAAAAAAGGT GGAAAGCCAT TTGGTAAAAA ACCTGCTGGA
AAGGGCGACA GACGAGATGA CCGAAGGGAC GATAAAAAAG GCGACAAGAA ACCATTTGGT
GGAAAACCAA AAGGTAGTGG AAATGCTAGT GGAAATCAGC CTCCAAAGGA ACGATCTGGC
GAAAAAAGAA GAGATTCAAC AAAAAAAGTT AAAGCTGAAA GAAAAGTGAT TGGAAAAACT
TCTTCACAGA ATTAA
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| Protein sequence | MLFIAFAPFG AFALEANSKN GEYSLDDIKY YKIFENEDIP KVMYELRQAN FEIIDELKNE
WEIGEESVSF EYTSSKNPLG ELIRDNLYEL GQKYEVFESE TDFVSKMNAW ATSFTKSMMK
KSSEQKDKLI VQTVNALDNL DETLNLFSER LREWYSLYFP EMDNLIKKHD IYVGLVSEYG
DREEYTRTKL KKTMPSNVAR TISLAAKESM GADVSEFDLE IMKNLANEIK SMYEYREKLQ
EYLETSMNEV APNLTKVAGA SLGARLISLA GGIERLLRLP ASTIQVIGAE KALFAHLRER
ALPPKHGVIF QHPLIQGSPW WIHGKIARAI SCKISIAIRA DAFGNDISDM LIEDMNKKVA
EIKEKFPEPM RKRRPRPDTR SFGNKGGQDR DRRSQGDRKP FDKKGDSKKG GKPFGKKPAG
KGDRRDDRRD DKKGDKKPFG GKPKGSGNAS GNQPPKERSG EKRRDSTKKV KAERKVIGKT
SSQN
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