| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0016 |
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| Symbol | codB |
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| ID | 5737952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | + |
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| Start bp | 15107 |
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| End bp | 16360 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641282484 |
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| Product | cytosine permease |
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| Protein accession | YP_001548074 |
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| Protein GI | 159904412 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1457] Purine-cytosine permease and related proteins |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCAAC AAAAATGTTC TGATCATGAT TATGCATTGG AATCAGTTCC AACTGAAAGT
AAAAAGGGAT TTTTACCAAT GTTTGCGATA ATGCTCGGAT TTACCTTTTT TTCAGCAAGT
ATGTGGGCGG GTGGAACCTT GGGGACAGGT TTAAAATTTT CTACATTTAT TTTAGTTGTT
TTAATAGGTA ATCTTTTATT GGGAGTATAT ACGGGGGCTC TTGCATATAT TGGATCAAGC
ACGGGCCTTT CCACGCACCT TCTCGCGAGA TACTCCTTTG GAGAAAAAGG TTCTTACTTG
GCATCGCTTA TTTTAGGAAT TACTCAGGTT GGATGGTTCG GTGTTGGAGT TGCCATGTTT
TCACTTCCAG TACACTACTC AACAGGAATC GATTTAAACG TTCTAATTTT ACTCTCAGGG
GTTTTGATGA CCTCAACTGC ATATTTTGGA ATAAAATCAC TTACCGCATT AAGTATAATT
TCTGTTCCTT TGATAACTAT ACTTGGCACT TACTCAGTAA CTGGAGCAGT TAATTCTATT
GGGGGCATTT CTAAACTTTT TACAGTTGAA CCTGTTGATA ATCTAGGACT TGCAGTTGGA
ATAACTCTTT GTATTGGTTC ATTTATCAGC GGGGGTACTT TGACACCAGA TTTTGCAAGA
TTTTCAAAAA ATAAATCTAT TGGAGTAATT TCAACATTTA TTGCTTTTTT TATAGGAAAC
TCTTTAATGT TTATATTTGG TGCAATTGGT GCTTCTACAT TGGGCCAGTT AGATATTTCT
GAGGTAATGC TTAAACAGGG GTTAATAATT CCTGCAATAA TAATTTTGGG ACTTAATATA
TGGACAACCA ATGATAACGC ACTTTATGCT TCAGGACTTG GTTTTTCAAA TATTACAAAA
ATACCTAAAA AATACATTGT AATTTTTAAT GGTTTAGTCG GAACCCTTGG AGCATTGGTA
CTGTATAATA ATTTTGTAGG CTGGCTGACT TTATTAAGTT CCATAATTCC TGCAATTGGC
GGGATCATCA TATCAGATTA TTTTGTAAAT AAAAATCAAA AGTATGCGTC ACTTGAAAAT
GTGAAATTTA AAAAAGTAAA ATGGAATGCT GTTATTGCGT GGATACTGGG CGTTTTGGCA
ACGAAATTTT TACCTGGAAT TTCACCAATA AACGCAGTTT TAGGTTCAGC AATTACATAT
ATTGTTCTGG AAAAGATAAG TAATAAAGTA CCATTTAAAA AGAAAAAAGA GTAA
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| Protein sequence | MSQQKCSDHD YALESVPTES KKGFLPMFAI MLGFTFFSAS MWAGGTLGTG LKFSTFILVV
LIGNLLLGVY TGALAYIGSS TGLSTHLLAR YSFGEKGSYL ASLILGITQV GWFGVGVAMF
SLPVHYSTGI DLNVLILLSG VLMTSTAYFG IKSLTALSII SVPLITILGT YSVTGAVNSI
GGISKLFTVE PVDNLGLAVG ITLCIGSFIS GGTLTPDFAR FSKNKSIGVI STFIAFFIGN
SLMFIFGAIG ASTLGQLDIS EVMLKQGLII PAIIILGLNI WTTNDNALYA SGLGFSNITK
IPKKYIVIFN GLVGTLGALV LYNNFVGWLT LLSSIIPAIG GIIISDYFVN KNQKYASLEN
VKFKKVKWNA VIAWILGVLA TKFLPGISPI NAVLGSAITY IVLEKISNKV PFKKKKE
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