| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1787 |
|---|
| Symbol | |
|---|
| ID | 4927912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 1738215 |
|---|
| End bp | 1738658 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640167309 |
|---|
| Product | NADH ubiquinone oxidoreductase, 20 kDa subunit |
|---|
| Protein accession | YP_001098298 |
|---|
| Protein GI | 134046813 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3260] Ni,Fe-hydrogenase III small subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAAG AGCTTTCAAG AAAGAAAAAT ATTCATATCA TGCTTGTTTA TACTGGCGGA
TGTAATGGTT GCGATATTGA AGTTGTAAAC TGTGTTTTGT CTCCATTTTA TGATGCGGAA
CAGTACAACG TATTTTTAAC GTGGAATCCA AGAGAAGCGG ATGTTTTAGT GGTAACTGGC
TGCGTTACAA AGGCAGTTTC TGCGTCACTT AAAAAAATAT ACGATGAAAT TCCTGAACCA
AAAGCAGTGA TCGCAGCAGG GGCCTGCGCA TTGATGGGTG GAGTTTACAA CAATATTGGT
GGAGATTTGG GAACTTCTAC ATTTATAGAT GGTCCTGTTG AAAATATAAT TCCAGTTGAT
ATGAAGGTTC CAGGATGCCC GCCAAGACCT GAAGACATTA TCTCGGGAAT TGTAAAAGCC
CTGCCAAAAA TCCTGAATGG ATGA
|
|---|
| Protein sequence | MLKELSRKKN IHIMLVYTGG CNGCDIEVVN CVLSPFYDAE QYNVFLTWNP READVLVVTG
CVTKAVSASL KKIYDEIPEP KAVIAAGACA LMGGVYNNIG GDLGTSTFID GPVENIIPVD
MKVPGCPPRP EDIISGIVKA LPKILNG
|
|---|
| |