| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1594 |
|---|
| Symbol | |
|---|
| ID | 4927492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 1536316 |
|---|
| End bp | 1537947 |
|---|
| Gene Length | 1632 bp |
|---|
| Protein Length | 543 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640167098 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001098105 |
|---|
| Protein GI | 134046620 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG5002] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.489984 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTAACA AAGATTATAC TCTGGTAGAT AGTATTAAAC AAGCTACTGG GGATGTTGCA
ACCATTTCTC TTGGAAAATA CAGAATATCC ACAAATTTAG AGAACAACGG GCAAAGAGTT
GTTGGAACTG CCATTTCCGA TGAAATATAC ACAACAGTAG TTAATCAAAA ACAAGATTAT
TATGCAAGAG CGGATGTTTT GGGAACGCAA TACCTTTGTG GATACACACC ACTTTATGAT
TGCCAAGGCA ATGCTGTTGG TATGGTATTT ACCGGAACTC CTGCAACACC TTATGATAAC
GTGGTATCCA AAATACTTTC AACAATTATT GTGGTTGGTT TGGCAGGGAT AATAATTGCG
ATAATTATCA CATTATTTAC CAATAAAAAA ATTACAAAAC CAGTTGACGA ACTTAAAAAA
GGTGCAGAAA TTTTCGGTAA TGGAAATTAC GAACATGTCG TAAAAGTCAG TACTGGTGAC
GAACTAGAAG AATTGGCCAA TTCATTTAAC GGTATGGCTC AAAATATTAA AGAAATGAAT
GAGCTTATGG ATACAGATAA AAAAGAACTT GGAGTTACAA TTAAAGATGT CGCAGACACA
ATGACTGCAG TTGCAAATGG GGATTTCACA GTAAGGGCTG ATGAAAAGAG AAAAAGAAAT
AATTTACAAA AAGCGATTAA CACTGCAATT AGAAATGTTG CACAGTTGAT TAAAGACCTA
AGAGAAGAAG TTGATCTATT GAACGTTCAG GTTCAAAAAG TTGAAGACGA ACTTAAAAGT
GCAGAAGAAA CTGCAACACA GGTTACAGAA GCTGCAAATC AGGTTGCAGA AGCTTCAAGT
GATCAGTCTG CAAAATTACA GGAAGCATCA GATCAGCTTG AAAATACTTA CGAAGTTGCA
AAAACTGTTT ACACGGATGC AGAAGAAACT GTCAGATCTG CAGAAGAAAT CAGCGAAAAC
TCTGAAAATG GGGTTAAAAA AGTTGAAAAC GCAATTTCAA GAATGCAAGG AATTACAAAT
GTAATTGACG ATTTAGGAAA ATCAATCCAA GAACTCGGTG AAGATGGTAA AAAAATCAAT
GAAGTAACCG ATTTAATTAA AGATATTGCA GAACAGACAG GACTCTTAGC TTTAAATGCT
TCAATTGAAG CTGCACGTGC AGGAGAAGCT GGAAAAGGGT TTGCAGTTGT TGCAAGCGAA
ATTAAAGCAC TTGCAGAAGA AATTAAAAAA TCCGTTGAAA ATATTAACCA CACGATTGAT
GGTGTCCACA AGCGAATCGG AGAAACGATG GATCTCGGAT TAAAAGGAAA AGATGAAGTC
GATAAAGGGG TAATTGCAAT CGACGAAGTA AATGATGCGC TCTTAAGAAT TAAAGAAAGT
GTTAATGGCG CTGCAATTAA AATAAATGGT ATTAAACAGG GAGCGCAGAG TGCTGCTGAC
AATACCGAAG GTGCTTTAAA GAATGCACAA GATATTGCAT CAATTTCAGA AGAGTTTACT
GCAACAGCAG AAGAAGTTAC TGCATCAACT GAAGAATTAA ATTCAATTAT TGAAGAAATC
AGAGGAATTG CAGAAGAAGT AACTCATGTA TCTGAGAGGG TGACTAGAAA ATCAGGTCAG
TTCAAAATTT AA
|
|---|
| Protein sequence | MINKDYTLVD SIKQATGDVA TISLGKYRIS TNLENNGQRV VGTAISDEIY TTVVNQKQDY
YARADVLGTQ YLCGYTPLYD CQGNAVGMVF TGTPATPYDN VVSKILSTII VVGLAGIIIA
IIITLFTNKK ITKPVDELKK GAEIFGNGNY EHVVKVSTGD ELEELANSFN GMAQNIKEMN
ELMDTDKKEL GVTIKDVADT MTAVANGDFT VRADEKRKRN NLQKAINTAI RNVAQLIKDL
REEVDLLNVQ VQKVEDELKS AEETATQVTE AANQVAEASS DQSAKLQEAS DQLENTYEVA
KTVYTDAEET VRSAEEISEN SENGVKKVEN AISRMQGITN VIDDLGKSIQ ELGEDGKKIN
EVTDLIKDIA EQTGLLALNA SIEAARAGEA GKGFAVVASE IKALAEEIKK SVENINHTID
GVHKRIGETM DLGLKGKDEV DKGVIAIDEV NDALLRIKES VNGAAIKING IKQGAQSAAD
NTEGALKNAQ DIASISEEFT ATAEEVTAST EELNSIIEEI RGIAEEVTHV SERVTRKSGQ
FKI
|
|---|
| |