Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_1475 |
Symbol | |
ID | 4927673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 1412186 |
End bp | 1412968 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640166970 |
Product | extracellular solute-binding protein |
Protein accession | YP_001097986 |
Protein GI | 134046501 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0984243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGACG TTAAAAAGCT AATTTTACTC GGACTAGTGG TAAGTTTGGT TGCATTTTCA GGTTGCACCG AAGATCAAGC TTCTGCTAAA GGTTCAATGA CTATGACAGA AGGTATTTTG GTTGTTGGAA CAGACCCAAC ATTCCCCCCA TTTGAAGAAA AAAACGCGGA TGGAGAACTC GTAGGTTTTG ACATTGATTT GATGAATGCC CTTGGAGAAA AAATGGGCAT AGAAATTCAG TTTGTTGAAC AGCCTTTTGA TGGCATTATC CCTGCATTAA AAGCAGAAAA ATTCGACTGT ATCATCTCTG CAGTTACAAT TACGGATGAC AGAGCAAAAG AAGTAGCTTT CACAAATTCA TACTTTGATG CGGCACAAGT TATCGCTGTT TTAATTGATG ACGATAGTGT TCAAAGTGTA GATGATTTAG CTGGAAAAGT TGTTGCAGCA CAGCTTGGAA CAACAGGAGA ATACGAAGCT CAACACTACG CTGAAGAATT AGGATTTGAA ATAAAATCAT ACGAAGTAAT GGCTGATGCA TTTATCGACA TGGAAAATGG AAGAGTTAAC GCAGTTGTTA CTGATGATGG TGTTGCTCAA AGATTCCTAG ATACAAAACC GGGAGTTTAC AAAGTTGTTG GAGAACCAAT GACTTCTGAA AGCTACGGTC TTGCAGCAAA CTTGGATAAC CAAGAATTAA TCGATGCACT CAATAATGCA TTAGCAGAAG TAAAAGAAGA TGGCACATAC GATGAAATCT ACGCAGAATG GTTTGATAAC TAA
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Protein sequence | MFDVKKLILL GLVVSLVAFS GCTEDQASAK GSMTMTEGIL VVGTDPTFPP FEEKNADGEL VGFDIDLMNA LGEKMGIEIQ FVEQPFDGII PALKAEKFDC IISAVTITDD RAKEVAFTNS YFDAAQVIAV LIDDDSVQSV DDLAGKVVAA QLGTTGEYEA QHYAEELGFE IKSYEVMADA FIDMENGRVN AVVTDDGVAQ RFLDTKPGVY KVVGEPMTSE SYGLAANLDN QELIDALNNA LAEVKEDGTY DEIYAEWFDN
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