Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_1422 |
Symbol | |
ID | 4928401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | + |
Start bp | 1363698 |
End bp | 1364477 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640166918 |
Product | proteasome subunit alpha |
Protein accession | YP_001097934 |
Protein GI | 134046449 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
TIGRFAM ID | [TIGR03633] proteasome endopeptidase complex, archaeal, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.186141 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACAAA TGGTTCCGGC ATCAGGATAC GATAGGGCAA TAACCATATT CAGCCCAGAA GGAAGACTTT ACCAGGTTGA ATATGCTAGA GAAGCAGTGA GACGAGGAAC CACTGCAGTT GGCATTAAGT GTAAAGATGG AGTAGTTCTC GCAGTTGATA GAAGAATTAC AAGCAAATTA ATCGATGTTT CTTCTATTGA AAAAATATTC CAGATTGACG ACCATATTGT AGCTGCCACA TCAGGTTTAG TTGCTGATGC AAGAGTTTTA ATCGATAGAG CAAGACTCGA AGCACAGATG AACAGGATTT CCTACGGTGA AGCAATCACC GTTGAAGCAC TTGCAAAAAA AATCTGTGAC ATTAAACAGG CATACACCCA ACACGGCGGC GCAAGACCAT TTGGTTTAGC ACTTTTAATT ACCGGAATCG ACAGACATAG TGCAAGATTG TTTGAAACTG ACCCAAGCGG TGCTTTAATA GAATACAAAG CAACAGCAAT CGGTTCAGGA AGGCCTATTG CAATGGAAGT TCTCGAATCA AAATATAGCG AAGATATGAC TGTTAACGAA GGAATGGAAT TAGCACTTTA CGCTTTAAGC AAAACTACTG AAGAATTAAA GCCTGAAAAC ATTGATATGG CAATTGTAAA GGATTCTGGA AAATTAGTTG AAAAAATAAG TGTTGATGAA ATCGAAAAAA TCGTAAAAGC AGTTTACAAA AAAGTTGAAG CTGAAGAAGC AGAAGCTGAA AAAAATAAAG GCGAAGAAGA TATTGAATAA
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Protein sequence | MQQMVPASGY DRAITIFSPE GRLYQVEYAR EAVRRGTTAV GIKCKDGVVL AVDRRITSKL IDVSSIEKIF QIDDHIVAAT SGLVADARVL IDRARLEAQM NRISYGEAIT VEALAKKICD IKQAYTQHGG ARPFGLALLI TGIDRHSARL FETDPSGALI EYKATAIGSG RPIAMEVLES KYSEDMTVNE GMELALYALS KTTEELKPEN IDMAIVKDSG KLVEKISVDE IEKIVKAVYK KVEAEEAEAE KNKGEEDIE
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