Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_1316 |
Symbol | |
ID | 4929224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 1262489 |
End bp | 1263052 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640166809 |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
Protein accession | YP_001097828 |
Protein GI | 134046343 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCATTTA TATTTAAAAA TTTAAAAATT CCCGAAGTAA TTTTAATTGA ACCAAAAGTT TTTCCTGACG AAAGAGGATT TTTTCTAGAA ACGTATAAAT TCAGCGACTT TTTTGATGCA GGCATAACTG AAAATTTTGT TCAAGATAAT CATTCAAAAT CAAAATATGG GGTTTTAAGG GGCCTACATT TTCAGAATGA TCCTAAAGCG CAGGGAAAAC TTGTACGGTG TATAAAAGGC GAAATTTTTG ACGTTGCAGT TGATTTACGA AGAAATTCTC CAAAATATGG AAAATGGGTT GGGGAAATTC TTTCAGAAGA AAACAAAAAA ATGTTATATA TTCCAAATGG ATTCGCACAC GGTTTTTGTG TTTTAAGTTC AGAAGCAGAA ATAATTTACA AATGCACTGA AGAATACGTT CCAGGATGCG ATGCAGGAAT ACTTTGGAAT GATGAAACAA TTGGAATTGA TTGGCCAGTA GTGGATCCAA TAATTTCAGA AAAAGATTCT TTGTTACCAA ATTTGGTAGA TTCAAATGTA AATTTCAGGT ATGGTGAAGA ATAA
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Protein sequence | MPFIFKNLKI PEVILIEPKV FPDERGFFLE TYKFSDFFDA GITENFVQDN HSKSKYGVLR GLHFQNDPKA QGKLVRCIKG EIFDVAVDLR RNSPKYGKWV GEILSEENKK MLYIPNGFAH GFCVLSSEAE IIYKCTEEYV PGCDAGILWN DETIGIDWPV VDPIISEKDS LLPNLVDSNV NFRYGEE
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