Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_1270 |
Symbol | |
ID | 4929275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 1219969 |
End bp | 1222200 |
Gene Length | 2232 bp |
Protein Length | 743 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640166763 |
Product | hypothetical protein |
Protein accession | YP_001097782 |
Protein GI | 134046297 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.235718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAC ACTTTCTTCT TTTTTTACTA TTCTTACTGG GTGTAATGGG TTCCGTAAAT GCGGAATATT TGACGGTTCC CGAAACCTGT ACTCCGTCTA GTTACTGTGT TGTACTGGAC GATAGTGCCA TGACTACGGA AGCAACGATA ACAATTATTG AAAATATAGA TTTTGTTGCT TATCTGCCTG TTGTTACTGG TGTAGATGGA AACACAATTT ATTTTGCTTC GGAAAAAGAT TTAGGTCGAT TCTGTAATTA TATTAGTGCA GATTACCTAC AAATTCCGTT CAATGGGGAG TTTTCGCCAT ATATAAATGG TCAATACTCA CCGTATGGGC TGTTAAAAGG TGTTTGGAGT TACGACCTTG GTGGGGATTA TGTCGAGGAT CATATTTACA TCAATACAAC AGTTCCTGAA ACGTTTTACA TGATGCTCTT TCCTAATCAC GGTCAATTTT CGGGGGACGA TATTTATCTA AACGGAAATA TGATTCATAC TTCCCACGAT GTAGCCTGTA CGACTCCTGT GTTTAAAACT CCCACATCTG CAATAACTAA CGATTTGCGT TTAGTTCTTG ATGGTTCGAG TTATGTTTCC CGAATGACCT ATACTGTGGT TATCTTTGGA AATTTCGTTT ATGATTCAAC TTCAAGTTAT TCAAGTATCT ATACAATGAT TGCACCGCCT GAACTGTACT ATATAACGTT TGAATCTGTT GTAAACGATT TTAATGTTTA TGATGGGGAT AATTTATTAG GAACGTTTGA TGATGGGGAT ATAATTCAAT TTGCAACTGG AACACATGAA ATAACAGTTG AAAAAGATGG ATTTACATAT ACTGAATCTG TGGTTATGGA TGAAGATTAT ACAATGCAAT TACCTTTTAG GTCTATTCCT TTGAGTATTG AATATTCAGA AGGTGGATTG ACTGATGTAA GCGTTTATAA AAATGGAACA TTTTTTAATA ATTATTCAGA TGGGGATTTA TTAGATGTTC TTGATGGAAC GTATGAATTT ACATTCGTTA AATCGGGTTT TTGGAATGAA ACAGAATCTT TTACAGTAAG TAACATTACT GAAGAAATAT CTGTTAGAAT GTACCCTGAA TCAGTATTTT TTAAAATTTC AAATACTCCT GTCGAAATTA CAACTTATTC AAATTCTGAA GTGAATATCG CACTAAACAT TGAACCAAAC GATAATGCTT ACGGTGTTAA GTTATACTTG ACAGGTCAGG AAGTTTTAGA TGTCAGGGAT TCTTCAAATG TTCAAATTTC AAAACAGGAT AGTTATTATT TACTTGATGA CCTTACAAAT GCAAAAACAG TAAATGTAAA AATTAATTCT GGAACTATTT TAGGTACAAA TAGTTTAGCT GTAAGGGTTA CAGGTTATAA TTCAATTGGT ACGGAGTTTG TAACAGATAC TACAATTGAT TACGAAATAG TAAGACTTCC ACTCTCTTTA ACAGTTCCTA ACTGGTGTAT TGGAAGTAAT TCTTTAACAG TTATTGAAAC TGAAGGGGAA ACAAGAACTG TTACTATAAA AGTTGAAGAT TCAGATGAAA ATATAATCTA TTCTGATTCA TATACGCTTG AAGGTTTTGA AACTCATAAA TTCAATATCG ACTTTGAAGA AACCGGAGAT TACAAACTTT ACATTCAATC AGGGGATTTA ATCAACACTT ACATTGATGT AAATGTGGCT AATCCTGTTT CTTTGACAAC AAAAACAATT ACTGCAAGTG AAGGAAGTAC TGGAACTGTA ACCGTAAGTA TTGAAAACCC ATTTTCAGAA CCCCAATATT ACAGATTAAC GATTGAAGGA ACTCCTTTAG TTAATTCTAC AAAAGTAGAT TTTTCAATTT CTCCAGGAAG TTCTAAAGTT CAATCACTGT CATTTACCTT GCTTGATAGT TTAGACTATG ACAGCTATTC ACTACCTTTG AAGGTTTATC TGGTAGAAGA ATCCGGTTTA ACTGAAATCT ATTCAGATAG TGTAATATTG AATATCGGTT CAAGTGGTTC ATTTATTCCT TTCATTGATT TAGATGATGG AATAATTGAT ACAGTAATTA CTTTGGTTTA TGATAACTAC AAAATCGCAG GAATTTTAAT TATTTCAGGT TTAGGTTTGT ATGTGGTCTT TGGAAGAAAA AAAGGTAAAA AACCTTTAAA AACCATTAAA AAGCCGATTG TAAAAAAAGA CGGTAAAAAG GGTGGTAAAT AA
|
Protein sequence | MKKHFLLFLL FLLGVMGSVN AEYLTVPETC TPSSYCVVLD DSAMTTEATI TIIENIDFVA YLPVVTGVDG NTIYFASEKD LGRFCNYISA DYLQIPFNGE FSPYINGQYS PYGLLKGVWS YDLGGDYVED HIYINTTVPE TFYMMLFPNH GQFSGDDIYL NGNMIHTSHD VACTTPVFKT PTSAITNDLR LVLDGSSYVS RMTYTVVIFG NFVYDSTSSY SSIYTMIAPP ELYYITFESV VNDFNVYDGD NLLGTFDDGD IIQFATGTHE ITVEKDGFTY TESVVMDEDY TMQLPFRSIP LSIEYSEGGL TDVSVYKNGT FFNNYSDGDL LDVLDGTYEF TFVKSGFWNE TESFTVSNIT EEISVRMYPE SVFFKISNTP VEITTYSNSE VNIALNIEPN DNAYGVKLYL TGQEVLDVRD SSNVQISKQD SYYLLDDLTN AKTVNVKINS GTILGTNSLA VRVTGYNSIG TEFVTDTTID YEIVRLPLSL TVPNWCIGSN SLTVIETEGE TRTVTIKVED SDENIIYSDS YTLEGFETHK FNIDFEETGD YKLYIQSGDL INTYIDVNVA NPVSLTTKTI TASEGSTGTV TVSIENPFSE PQYYRLTIEG TPLVNSTKVD FSISPGSSKV QSLSFTLLDS LDYDSYSLPL KVYLVEESGL TEIYSDSVIL NIGSSGSFIP FIDLDDGIID TVITLVYDNY KIAGILIISG LGLYVVFGRK KGKKPLKTIK KPIVKKDGKK GGK
|
| |