| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1067 |
|---|
| Symbol | |
|---|
| ID | 4927538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 1023913 |
|---|
| End bp | 1024650 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640166562 |
|---|
| Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
|---|
| Protein accession | YP_001097585 |
|---|
| Protein GI | 134046099 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
|---|
| TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.592657 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATATG ATATTTCAAA AATAACTGCA AAAGAGCCTA TTTACGCTGG AAAAGCAAAA
TCAATCTACA AAATCGAAGA AAACGAAAAA GAAGTTTTGG TTGAATTCAG AGACGATATA
ACTGCTGGAA ACGGTGCAAA ACACGACGTA AAATCTGGAA AAGGATATTT AAACACCTTA
ATTTCAAACG AACTTTTCAA AATACTCGAA CAAAATAACG TTCCAACACA CCTTATCGAG
TACATCGAGC CAAACCACAT GATTGCAAAG AACGTTAAGA TAATTCCTTT GGAAGTAATT
GTAAGAAACA TTGCTGCAGG AAGCCTCTGT AAAAAATATC CATTCGAACA GGGACAGGTA
TTAAAAACAG CAGTTACACA GTTTGATTAC AAAAATGACG ACTACGGAGA CCCAATGTTG
AACAATGAAA TTACAATTGA ACTTGGTCTT GCAACCGAAG AAGAATTAGT TGAAATTAAA
AAACTCGCTT TAAAAGTGAA CGACGTTTTA AAAGGATTTT TCGATGAAAA AGGAATAATT
TTAGTTGATT TTAAAATCGA AGTTGGAAAA ACCGTTGATG GTGACATTGT TGTTGCTGAC
GAAATTAGCC CCGATACAAT GAGACTTTGG GACAAAGAAA CAAAAGACGT TCTTGATAAG
GATGTATTTA GAAAAGATTT AGGCGATGTT TTGGAAAAAT ACAAAACCGT TGCTAAAAGA
ATCGGATGTT TAAAATAA
|
|---|
| Protein sequence | MSYDISKITA KEPIYAGKAK SIYKIEENEK EVLVEFRDDI TAGNGAKHDV KSGKGYLNTL
ISNELFKILE QNNVPTHLIE YIEPNHMIAK NVKIIPLEVI VRNIAAGSLC KKYPFEQGQV
LKTAVTQFDY KNDDYGDPML NNEITIELGL ATEEELVEIK KLALKVNDVL KGFFDEKGII
LVDFKIEVGK TVDGDIVVAD EISPDTMRLW DKETKDVLDK DVFRKDLGDV LEKYKTVAKR
IGCLK
|
|---|
| |