Gene MmarC5_0968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_0968 
Symbol 
ID4928690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp940186 
End bp941418 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content35% 
IMG OID640166466 
Producthypothetical protein 
Protein accessionYP_001097489 
Protein GI134046003 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1361] S-layer domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACTTT TGAGTAAGTC TGGACTATTA TTACTTGCAT TTGTATTAAT AACGAGTTCT 
TATGCGCTAT CTGTGGACGA TCCGCAGTAT GAGGTAGATA ATTCTGAGTT TGGAGAAACA
AATCCAAACG TGATACATCC GGGGGATGAT GTAAACATTT GGATAAAGAT AGTTAACGAC
AACTACGATA AACAGTTAAA AGACATCAAA GTCGAAATAA GTCCGCATTA TCCATTTGAA
ATAAAACAGG TGAACCCTGA AACAGGTATT GCTAAAATTT CACATCTTAA CGAGGGTGAA
AGTGATACCG CATACTTTAA AATACATGTA AGCGAGAATG CACCTTCTGA CGAGTACAGA
ATTGATGTTA CAGTAACTGC AACTGAATAT GATCCCAATG ACGATGCAAA TGAAAAGCAG
AAATCAGTAA CAAAAATATA TTACGTCCCA ATATACGGAA TTGCTAAATT TGAAATTAAT
TTAGACGATA CCACTCCAAT AAACCCTTCA GAATCCGAAG AACTTGAAAT TTATATCAAA
AATCAAGGAA CTGGAACTGC AAAGTATCTG ACTTTAAATT TGGCTGGAAC AAGCGATCTA
AACATTGTTG GACCAACAAC ATTCTATCTG GAATCATTAA GTCCACAAAC TCAAAAATTA
ATAACCGTTG ATGCATACGC AATTCCAACA ACCGAAGATG GAATTTATTC CATAAATGCA
AATATTGAAT GGGTTGGGGA AGACGGAGCA GAATATACTT CATCAATTCC GATAAATCTA
AAAGTAAAAA GTACAATTTT TGACAACCAG CCGTTTTTAT ATCTTGATGG TGTACAACCG
ATTTCTGGAG GTCAAGAAGT AACAATTGCG CTTGCAAACA GGGGAACTTC GAAATTGAAG
CACTGCGTAC TTGAAATTGA TGGTGCAGTT GAATTAAACG ATAATTACAT TCGATATATC
GGCGATTTAG AAGAAGATGA TTCTGATTCA GGAATATATG AATTGGAAAT ATTTGGGGAT
TCAAAAACAA ATATCACTGC AACTTTGACA TACTTTAACG AATACCACGA AGAATTTACC
ATTAAACAGG AATTCGAACT CGATCCCGCT AACAGCCAGG TAAAACAGGA AGGAACCAAT
TACTCATTTA TTGGAATAAT TGTCGTTGTA GCAGTTGTTG CGTACATTTT ATATAGAAGA
TGGAAAAAGA GAAAAGATTC TGAAGAAGAA TAA
 
Protein sequence
MGLLSKSGLL LLAFVLITSS YALSVDDPQY EVDNSEFGET NPNVIHPGDD VNIWIKIVND 
NYDKQLKDIK VEISPHYPFE IKQVNPETGI AKISHLNEGE SDTAYFKIHV SENAPSDEYR
IDVTVTATEY DPNDDANEKQ KSVTKIYYVP IYGIAKFEIN LDDTTPINPS ESEELEIYIK
NQGTGTAKYL TLNLAGTSDL NIVGPTTFYL ESLSPQTQKL ITVDAYAIPT TEDGIYSINA
NIEWVGEDGA EYTSSIPINL KVKSTIFDNQ PFLYLDGVQP ISGGQEVTIA LANRGTSKLK
HCVLEIDGAV ELNDNYIRYI GDLEEDDSDS GIYELEIFGD SKTNITATLT YFNEYHEEFT
IKQEFELDPA NSQVKQEGTN YSFIGIIVVV AVVAYILYRR WKKRKDSEEE