Gene MmarC5_0966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_0966 
Symbol 
ID4928594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp937255 
End bp939492 
Gene Length2238 bp 
Protein Length745 aa 
Translation table11 
GC content33% 
IMG OID640166464 
Producthypothetical protein 
Protein accessionYP_001097487 
Protein GI134046001 
COG category[R] General function prediction only 
COG ID[COG4880] Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGCA ATATAATTAT TATTTTGGGG CTACTTTTAG TAACCTCTGC AGTTTTTTTA 
ACCTATAATC CGAAAGATAA TTCTGGAATA AGTTATACGG GGGATTTTAA TGTAGTTCCT
GCAAATTCTG AAGAAAATTT TAATAATTTT GTAAAACAAC TATCAGATTC TGGGTATTAT
TATGGTAGTA GTAATATTGC AGTAAAAGAT TATGCTGTAA CGTCTGAGAT TGCTTACGAT
ACTGATTCAG TAGCACAGGG ATATTCTGAA GAGCGATATT CGGAGACAAA TGTTCAGGTA
GTTGGCGTAG ATGAAGCTGA TATTGTAAAA ACAAATGGTG AACTTATATT TTATACAACA
CAAGGTCCAA CTTGGAGTAG TTATTGGGGA CAGGTTACCT ATGCAATTGA TGCAGTACCT
GCCGAAACTG CCCAAATAAT TGGAAATATC TCTGAAGGTG GAAATCTCTA TCTTGACGGA
AATAATTTAA TTGTAATTAC CTATGAAGGA ATTAAAAATT ACAACATTTC AGATCCAAAA
TCGCCTGAAT TAATATGGGC AAAGGATTTA AACGGATCAT ACGTTGATTC GAGATTAATT
GATGGTGAAT TATACTTAAT AGTTCAGGAA TATGGAATAA ATGGGCCAAT AATATGGAAT
GGTGTTAAAA TTGGATATGA AAGTATATAC ATTCCAGTAA TTCCTGATAT CATGTACCCG
AGCTTTGAAT CGACATACAT TATTTCGTCA ATGGATGTTG AAAGCGGAGA TATTGAAAAC
ACGGTTGCAT TGGTAGGTTC ATACAGTAAC ACGGTCTATG TTTCAGAAGA AAACATGTAT
TTTGCTTATG AACTCGATTA TAATGAAGAT AAACTGATAA TGAAGTTTGT AAGTGAAAAT
AGTGATAAAT ATTTCCCGAA AGAAGTAGCT GACAAACTTG ATCGGGTATT TTCAAATACT
GATTTTGGGG ACAGTGCAAA ATATGTTGAA ATGACTGAAA TTCTTGAAGA TTACCTAAAA
ACACTATCTT CAGAAGAAAT GAATAATTTG GAAAATGAAA TTGAAAATGA TTATGAAATT
TATTTGAAAG ATCACTGGGA AGAACTTGAA GGAACCGGTA TTGCAAAAAT AAGTCTCGAT
GATTTTGAAT TAACAAGCGG AAAAGTTCCA GGAACCATTT TAAACAGCTT TTCGATGGAC
GAATATACTG GAAACTTAAG AATTGCAACA ACAATTGGAA ACGACTGGAG ATACAATGAC
ATACAAACAA ATAACATCTA TGTATTCGAC GAAAACATGG AAATCATTGG AAAAGTAACA
GGCCTTGAAG AGGGGGAAAG AATATATTCT GCAAGGTTTA TTGGCGACAA AGCATACGTT
GTAACCTATA AAGAAACCGA TCCTTTACTT GTAATTGATT TAGGGGATCC GATAAATCCA
GAAGTTCTCG GTGAATTAAA AATTCCAGGA TATTCTACTT ATTTGCATCC AATTGGAGAT
AATAACTTAA TTGGAATTGG AAAAGATGAC TCAAATATGG TAAAAATTTC ATTATTTGAC
ATATCTGACT TTGAAAACCC AAAAGAACTT TCAAAATATT CATTAAACGA ATACTGGTCA
ACTGCACTCT ACGAACATCA CGCATTTTTG TGGGATTCTG AAAAAGAAAT ACTTGTACTT
CCAGCTGGAA GCCACGCATA TGCTTTAGAA GTTAAAGAAA GCGGAATTAC AATGGTCAAA
GATGATGTTT TCAAAGACTA CGGTGTTTTA AGGTCATTAT ATATTGGAGA TTACCTCTAC
ACATTTTCAA ACTATGAAAT ACACGTAATC GATGAAAATA CCTGGGAAAC CGTAAAAACA
ATTAATTTAC CAAAATATGA ATATCCTTAT TATGAACCTT ACATTGAATT AGTTGAAGAT
ACTTCAGACG TTGAGGTGGA AACTACTGAA GAAAATATGG TTATCGGGGA AAATATGACT
ATAAAACTTG ATGAAAACCC GACAACAGGA TATACTTGGA ATTATTCAAT AAGTGATAAA
AATAAAATAG AATTATTGTT CGATGAATAT ATTCAAGATG ACGTAGAAGA CGGTATTGTT
GGTGCAGGTG GAGTTCACGA GTGGACTTTT AATGCAACCG AATCAGGAGA AGTCGAAATA
AAATTTGATT ACTACCGTTC ATGGGACGGA ATTGATGGTT CCTCAAGCAC AAAAGTCTAT
AAAATAACAG TTGAATAA
 
Protein sequence
MNRNIIIILG LLLVTSAVFL TYNPKDNSGI SYTGDFNVVP ANSEENFNNF VKQLSDSGYY 
YGSSNIAVKD YAVTSEIAYD TDSVAQGYSE ERYSETNVQV VGVDEADIVK TNGELIFYTT
QGPTWSSYWG QVTYAIDAVP AETAQIIGNI SEGGNLYLDG NNLIVITYEG IKNYNISDPK
SPELIWAKDL NGSYVDSRLI DGELYLIVQE YGINGPIIWN GVKIGYESIY IPVIPDIMYP
SFESTYIISS MDVESGDIEN TVALVGSYSN TVYVSEENMY FAYELDYNED KLIMKFVSEN
SDKYFPKEVA DKLDRVFSNT DFGDSAKYVE MTEILEDYLK TLSSEEMNNL ENEIENDYEI
YLKDHWEELE GTGIAKISLD DFELTSGKVP GTILNSFSMD EYTGNLRIAT TIGNDWRYND
IQTNNIYVFD ENMEIIGKVT GLEEGERIYS ARFIGDKAYV VTYKETDPLL VIDLGDPINP
EVLGELKIPG YSTYLHPIGD NNLIGIGKDD SNMVKISLFD ISDFENPKEL SKYSLNEYWS
TALYEHHAFL WDSEKEILVL PAGSHAYALE VKESGITMVK DDVFKDYGVL RSLYIGDYLY
TFSNYEIHVI DENTWETVKT INLPKYEYPY YEPYIELVED TSDVEVETTE ENMVIGENMT
IKLDENPTTG YTWNYSISDK NKIELLFDEY IQDDVEDGIV GAGGVHEWTF NATESGEVEI
KFDYYRSWDG IDGSSSTKVY KITVE