Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0966 |
Symbol | |
ID | 4928594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 937255 |
End bp | 939492 |
Gene Length | 2238 bp |
Protein Length | 745 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640166464 |
Product | hypothetical protein |
Protein accession | YP_001097487 |
Protein GI | 134046001 |
COG category | [R] General function prediction only |
COG ID | [COG4880] Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCGCA ATATAATTAT TATTTTGGGG CTACTTTTAG TAACCTCTGC AGTTTTTTTA ACCTATAATC CGAAAGATAA TTCTGGAATA AGTTATACGG GGGATTTTAA TGTAGTTCCT GCAAATTCTG AAGAAAATTT TAATAATTTT GTAAAACAAC TATCAGATTC TGGGTATTAT TATGGTAGTA GTAATATTGC AGTAAAAGAT TATGCTGTAA CGTCTGAGAT TGCTTACGAT ACTGATTCAG TAGCACAGGG ATATTCTGAA GAGCGATATT CGGAGACAAA TGTTCAGGTA GTTGGCGTAG ATGAAGCTGA TATTGTAAAA ACAAATGGTG AACTTATATT TTATACAACA CAAGGTCCAA CTTGGAGTAG TTATTGGGGA CAGGTTACCT ATGCAATTGA TGCAGTACCT GCCGAAACTG CCCAAATAAT TGGAAATATC TCTGAAGGTG GAAATCTCTA TCTTGACGGA AATAATTTAA TTGTAATTAC CTATGAAGGA ATTAAAAATT ACAACATTTC AGATCCAAAA TCGCCTGAAT TAATATGGGC AAAGGATTTA AACGGATCAT ACGTTGATTC GAGATTAATT GATGGTGAAT TATACTTAAT AGTTCAGGAA TATGGAATAA ATGGGCCAAT AATATGGAAT GGTGTTAAAA TTGGATATGA AAGTATATAC ATTCCAGTAA TTCCTGATAT CATGTACCCG AGCTTTGAAT CGACATACAT TATTTCGTCA ATGGATGTTG AAAGCGGAGA TATTGAAAAC ACGGTTGCAT TGGTAGGTTC ATACAGTAAC ACGGTCTATG TTTCAGAAGA AAACATGTAT TTTGCTTATG AACTCGATTA TAATGAAGAT AAACTGATAA TGAAGTTTGT AAGTGAAAAT AGTGATAAAT ATTTCCCGAA AGAAGTAGCT GACAAACTTG ATCGGGTATT TTCAAATACT GATTTTGGGG ACAGTGCAAA ATATGTTGAA ATGACTGAAA TTCTTGAAGA TTACCTAAAA ACACTATCTT CAGAAGAAAT GAATAATTTG GAAAATGAAA TTGAAAATGA TTATGAAATT TATTTGAAAG ATCACTGGGA AGAACTTGAA GGAACCGGTA TTGCAAAAAT AAGTCTCGAT GATTTTGAAT TAACAAGCGG AAAAGTTCCA GGAACCATTT TAAACAGCTT TTCGATGGAC GAATATACTG GAAACTTAAG AATTGCAACA ACAATTGGAA ACGACTGGAG ATACAATGAC ATACAAACAA ATAACATCTA TGTATTCGAC GAAAACATGG AAATCATTGG AAAAGTAACA GGCCTTGAAG AGGGGGAAAG AATATATTCT GCAAGGTTTA TTGGCGACAA AGCATACGTT GTAACCTATA AAGAAACCGA TCCTTTACTT GTAATTGATT TAGGGGATCC GATAAATCCA GAAGTTCTCG GTGAATTAAA AATTCCAGGA TATTCTACTT ATTTGCATCC AATTGGAGAT AATAACTTAA TTGGAATTGG AAAAGATGAC TCAAATATGG TAAAAATTTC ATTATTTGAC ATATCTGACT TTGAAAACCC AAAAGAACTT TCAAAATATT CATTAAACGA ATACTGGTCA ACTGCACTCT ACGAACATCA CGCATTTTTG TGGGATTCTG AAAAAGAAAT ACTTGTACTT CCAGCTGGAA GCCACGCATA TGCTTTAGAA GTTAAAGAAA GCGGAATTAC AATGGTCAAA GATGATGTTT TCAAAGACTA CGGTGTTTTA AGGTCATTAT ATATTGGAGA TTACCTCTAC ACATTTTCAA ACTATGAAAT ACACGTAATC GATGAAAATA CCTGGGAAAC CGTAAAAACA ATTAATTTAC CAAAATATGA ATATCCTTAT TATGAACCTT ACATTGAATT AGTTGAAGAT ACTTCAGACG TTGAGGTGGA AACTACTGAA GAAAATATGG TTATCGGGGA AAATATGACT ATAAAACTTG ATGAAAACCC GACAACAGGA TATACTTGGA ATTATTCAAT AAGTGATAAA AATAAAATAG AATTATTGTT CGATGAATAT ATTCAAGATG ACGTAGAAGA CGGTATTGTT GGTGCAGGTG GAGTTCACGA GTGGACTTTT AATGCAACCG AATCAGGAGA AGTCGAAATA AAATTTGATT ACTACCGTTC ATGGGACGGA ATTGATGGTT CCTCAAGCAC AAAAGTCTAT AAAATAACAG TTGAATAA
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Protein sequence | MNRNIIIILG LLLVTSAVFL TYNPKDNSGI SYTGDFNVVP ANSEENFNNF VKQLSDSGYY YGSSNIAVKD YAVTSEIAYD TDSVAQGYSE ERYSETNVQV VGVDEADIVK TNGELIFYTT QGPTWSSYWG QVTYAIDAVP AETAQIIGNI SEGGNLYLDG NNLIVITYEG IKNYNISDPK SPELIWAKDL NGSYVDSRLI DGELYLIVQE YGINGPIIWN GVKIGYESIY IPVIPDIMYP SFESTYIISS MDVESGDIEN TVALVGSYSN TVYVSEENMY FAYELDYNED KLIMKFVSEN SDKYFPKEVA DKLDRVFSNT DFGDSAKYVE MTEILEDYLK TLSSEEMNNL ENEIENDYEI YLKDHWEELE GTGIAKISLD DFELTSGKVP GTILNSFSMD EYTGNLRIAT TIGNDWRYND IQTNNIYVFD ENMEIIGKVT GLEEGERIYS ARFIGDKAYV VTYKETDPLL VIDLGDPINP EVLGELKIPG YSTYLHPIGD NNLIGIGKDD SNMVKISLFD ISDFENPKEL SKYSLNEYWS TALYEHHAFL WDSEKEILVL PAGSHAYALE VKESGITMVK DDVFKDYGVL RSLYIGDYLY TFSNYEIHVI DENTWETVKT INLPKYEYPY YEPYIELVED TSDVEVETTE ENMVIGENMT IKLDENPTTG YTWNYSISDK NKIELLFDEY IQDDVEDGIV GAGGVHEWTF NATESGEVEI KFDYYRSWDG IDGSSSTKVY KITVE
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