Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0949 |
Symbol | |
ID | 4928234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 923180 |
End bp | 924007 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640166447 |
Product | phage integrase family protein |
Protein accession | YP_001097470 |
Protein GI | 134045984 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.427827 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATGATA AATCGAGAGA GCTTGTCGAA AGATATTTGA AATTCTGTTC GGGTCTGAGT GAAACTACCC TTGTAAATTA TAAATCTACT ATGAAAATCT TCCTAAATTA CTATGACGAT AGTCTTTCAT TTGAAAATTT AACAATAGAA GACATAATTG AATTTTTTGA GGTGTATGAA GCTTCGAGAA ATACAAAAAT ATACCGTATA AGGTCTCTAA ATAGATTTTA TGAATGGGCT AATAAACATA AATATATTAC GGGCAATCCA GTTAGAAGTT TTTTAAATAC TCTGAAACCC GATAAAAAGG AAAGGGATTA TTTGACTCAA AAACAGTCAG ATGACCTTCT TAGAAGTATA ATTGATGTTA ATTTCTATAT TTTTACCATG TTTTTTATTA AAACAGGGGT GAGGGTTTCA GAATTTCAGA ATATACTACT TGATGATGTA GATTTTAACG AGCAAACAAT TTTTATACGT GGTGGAAAGG GTAGAAAAGA TAGATTTGTG TTTTTTGACT TAGATATGGG AATTAATCTA AAAAGATGGC TTCGAGAAAG GGATATTTTA AAACCAAAAG CACCGAATTT GTTTTTAAAT CGGCGTGGTA AGGCAATCGG GAAGTCATCT ATAACGCATT ATATCAATTA TTTGAATGAC GTTTATGGAA AAAAGGTTAA TAAACGGATT ACTCCGCATA TATTGAGACA TACCTTTGCA ACAACTTGCG TGGATAAAGG AATGGATTTA AGAACACTTC AAGACATTTT AGGTCACGAA GACATTAAAA CAACTTCGAT TTTCTTCATA AGAATAAAGA GAGTTTAA
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Protein sequence | MNDKSRELVE RYLKFCSGLS ETTLVNYKST MKIFLNYYDD SLSFENLTIE DIIEFFEVYE ASRNTKIYRI RSLNRFYEWA NKHKYITGNP VRSFLNTLKP DKKERDYLTQ KQSDDLLRSI IDVNFYIFTM FFIKTGVRVS EFQNILLDDV DFNEQTIFIR GGKGRKDRFV FFDLDMGINL KRWLRERDIL KPKAPNLFLN RRGKAIGKSS ITHYINYLND VYGKKVNKRI TPHILRHTFA TTCVDKGMDL RTLQDILGHE DIKTTSIFFI RIKRV
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