| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0908 |
|---|
| Symbol | |
|---|
| ID | 4929185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 889443 |
|---|
| End bp | 891068 |
|---|
| Gene Length | 1626 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640166406 |
|---|
| Product | Na/Pi-cotransporter II-related protein |
|---|
| Protein accession | YP_001097429 |
|---|
| Protein GI | 134045943 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1283] Na+/phosphate symporter |
|---|
| TIGRFAM ID | [TIGR00704] Na/Pi-cotransporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTTG CGTTGATTGC AGGGGTCCTT GGAGGACTTG CATTATTCAT TTACGGAATG
AATTTAATGG GTAATGGGCT TCAAAAAGTT GCGGGAGATG GATTAAAACG ACTTATTGAA
GTTTTAACTA AAAATAAATA CCTTGGCGTG TTGGTTGGAA CTGTTGTAAC GATGTTGATT
CAAAGCAGCA GTGCAACAAC GGTTATGGTT GTTGGTTTCG TTAATGCATC ATTAATGAAC
CTCAGTCAAG CAATTGGGGT CATCATGGGT GCAAATATAG GTACTACAGT TACTGCACAG
CTTGTAGCAT TTAAATTAAC AGATATTGCG CCATTGATTG TTGCAATTGG GGTCATTTTA
CAACTTATTT CAAAAAAACG AAAACATTCA GATATTGCAG AAGTTTTGAT TGGTTTTGGT
ATTTTATTTA TTGGAATGCA CACGATGTCA AGTGTATTAA AACCGCTTGC AGGAGAACCA
TTCTTTACAG ATCTATTAAT GAATCTTGAA AATCCAGTTC TTGGATTACT TGTTGGACTT
GGAATGACGC TTATGATTCA AAGCAGTAGT GCTACGATCG GACTTTTGAT TGCAGTAGCG
TCTACTGGAG CATTAAGCCT TTTGGTTGCA TTTCCGATAT TATTTGGTGA CAACATCGGA
ACTTGTGTTA CGGCACTTCT TTCGAGTATC GGTGCAAACA GGACTGCAAA AAGAGCTGCT
CTTATGCACT TGCTCTTTAA CGTTACAGGT GCACTGATAT TCATGGTTTT GATCTATACA
ACCCCTTTAA TTTCATGGAT TCAAAGTTTG AGTGCAGGAA GTATTGAAAG ACAAATTGCA
AACGCGCACA CAATATTTAA CGTTACAAAC ACGCTTATAA TGCTCCCATT TGCAGGATTT
TTCGTCTATG CAGTTGAAAA ACTAATTCCA ATAAAAGATT ATGAAAAAGA ATTCATGCCT
GTAAAACATC TTGATTCAAG GATTATTGAG GAGATGCCGT CAATTGCGAT CGGACTTGGA
ATAAAAGAAG TTGTAGAGAT GGGAAAGTTC GTACGTGAAA ATCTAAGACT TGCAAAAGAT
GCTTTTGTAA CTAAAAACGT TCAAATTATC AAAGAAGTGC ATGAGAAAGA AGCAATTATA
GACACGATGG CCCATGAAAT TACAAACCAT TTAATTGAAC TTTCAAACCA AGAAATTTCG
GACAGTCAAA AATTAAAAAT CACGAGTCTC ATCAGTAACG TTACAAGCCT TGAGAGAATC
GGGGACCTTG CAGAAGATAT TGCTGATCAT GCTGAAAACG TAATGGAAGA TAATATTGAG
TTTACCGATA CTGCAATTGA AGAAATCAAC GTCATGTTTG ATAAGGTAAT GACCGCTTTA
GAGACTGCAA TCGAAGCTTT TGAGACTGAA GACGAAGTAT TAATCGAAAG AGTAACTTTC
CTCGAAGATG AAGTTGACAA TCTTGAAAAA ACATTTAGAA AAAAACATAT TAAAAGATTA
AATTCCAAAG AATGTGCCCC AAAAGCGAGC ATTATATTTT TGGATATTAT CGGATACCTT
GAAAGAATAT CTGACCACGC TGTAAAAATT GCAACAGGCC TTGAAGACGA AGAATTTGAT
GCATAA
|
|---|
| Protein sequence | MEFALIAGVL GGLALFIYGM NLMGNGLQKV AGDGLKRLIE VLTKNKYLGV LVGTVVTMLI
QSSSATTVMV VGFVNASLMN LSQAIGVIMG ANIGTTVTAQ LVAFKLTDIA PLIVAIGVIL
QLISKKRKHS DIAEVLIGFG ILFIGMHTMS SVLKPLAGEP FFTDLLMNLE NPVLGLLVGL
GMTLMIQSSS ATIGLLIAVA STGALSLLVA FPILFGDNIG TCVTALLSSI GANRTAKRAA
LMHLLFNVTG ALIFMVLIYT TPLISWIQSL SAGSIERQIA NAHTIFNVTN TLIMLPFAGF
FVYAVEKLIP IKDYEKEFMP VKHLDSRIIE EMPSIAIGLG IKEVVEMGKF VRENLRLAKD
AFVTKNVQII KEVHEKEAII DTMAHEITNH LIELSNQEIS DSQKLKITSL ISNVTSLERI
GDLAEDIADH AENVMEDNIE FTDTAIEEIN VMFDKVMTAL ETAIEAFETE DEVLIERVTF
LEDEVDNLEK TFRKKHIKRL NSKECAPKAS IIFLDIIGYL ERISDHAVKI ATGLEDEEFD
A
|
|---|
| |