| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0880 |
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| Symbol | |
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| ID | 4929300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 860451 |
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| End bp | 861833 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640166380 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_001097403 |
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| Protein GI | 134045917 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00408] prolyl-tRNA synthetase, family I |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.276664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTTT CTGAATGGTA TAGCGACATA CTAGAAAAAG CCGGAATTTA CGACTTAAGA
TACCCTATAA AAGGATGCGG GGTTTATTTG CCATATGGTT TTAAAATCAG AAGATATTCC
TTTGAAATCT TAAGAAAATT ACTCGATGAA ACAAATCACG ATGAAACACT CTTTCCAATG
TTAATCCCTG AAAATTTACT TGCAAAAGAA GGAGAACACA TCAAAGGATT TGAAGATGAA
GTTTTCTGGG TAACTCATGG TGGAAAAACT CCATTGGAAG TAAAACTTGC TTTAAGGCCC
ACTTCTGAAA CTACAATGTA CTACATGATG AAACAATGGA TTAAAGTACA CACTGACCTT
CCAATGAAAC TGTACCAAGT TGTAAACACA TTCAGATACG AAACGAAACA TACAAGGCCA
TTAATCAGAT TAAGAGAAAT AATGAGCTTT AAAGAAGCAC ACACCGCTCA TGCAACAAAA
GAAGATTGCG ATGCCCAAAT TACAGAAGCA TTAAATCTCT ACGGGGAATT CTTTGACGAA
ATCTGTGTAC CGTATATTAT TTCTAAAAGG CCAGAATGGG ATAAATTCCC AGGAGCGGAC
TACACAATGG CATTTGATAC CATCTACCCC GATGGAAAAA CAATGCAGAT TGGAACTGTT
CACAATCTTG GCCAGAACTT TGCAAAAACT TTCGAACTTG AATTTGAAAC GCCAGATGGC
GAAAAAGATT TCGTGTACCA AACATGCTAC GGAATTTCTG ATAGGGCGAT TGCATCATTA
ATTTCAGTCC ACGGAGACGA AAAAGGTCTT GTAATCCCTG TAGATGTTGC ACCAATCCAA
ATTGTTCTCA TTCCGTTATT ATTCAAAGGA AAAGAAGAAA TTGTAATGGA CAAAATTAAA
GAATTAAACA ATACTTTAAA ATCAGAATTT AGAGTACATC TTGATGATAG AGATATTAGG
CCAGGAAGAA AATACAACGA CTGGGAAATA AAAGGAGTTC CATTGAGAAT CGAACTTGGA
CCAAGAGATA TCGAAAACGG ACAAGCTTTA ATCGTTAGAA GAGACACTGG CGAAAAAATA
ACCGTTGAAT ATTCAAATAT TTTAGAAGAA GTTGAAAAAA TAGTTTCAAT GTACAAAGAA
AACTTAAAAA TTAAAGCTGA TGAAAAAATT AAAAATTTCT TAACAGTTGT TAACTTTGAA
AGCGATGTAA ATGCACTTTC AGAAAAAGTT AAAGCTGCAC TTTTAGAGAA CAAGGGAATA
ATACTCATTC CATTTGATGA ATCAGTGTAC AACGAAGAAT TTGAAGAATT GATCGATGCA
TCAGTTTTAG GTCAGACTGC CTATGAAGGA AAAGACTATA TTTCAGTTGC CAGAACATAC
TAA
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| Protein sequence | MEFSEWYSDI LEKAGIYDLR YPIKGCGVYL PYGFKIRRYS FEILRKLLDE TNHDETLFPM
LIPENLLAKE GEHIKGFEDE VFWVTHGGKT PLEVKLALRP TSETTMYYMM KQWIKVHTDL
PMKLYQVVNT FRYETKHTRP LIRLREIMSF KEAHTAHATK EDCDAQITEA LNLYGEFFDE
ICVPYIISKR PEWDKFPGAD YTMAFDTIYP DGKTMQIGTV HNLGQNFAKT FELEFETPDG
EKDFVYQTCY GISDRAIASL ISVHGDEKGL VIPVDVAPIQ IVLIPLLFKG KEEIVMDKIK
ELNNTLKSEF RVHLDDRDIR PGRKYNDWEI KGVPLRIELG PRDIENGQAL IVRRDTGEKI
TVEYSNILEE VEKIVSMYKE NLKIKADEKI KNFLTVVNFE SDVNALSEKV KAALLENKGI
ILIPFDESVY NEEFEELIDA SVLGQTAYEG KDYISVARTY
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