Gene MmarC5_0840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_0840 
Symbol 
ID4928465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp814483 
End bp815142 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content36% 
IMG OID640166340 
Productcobalamin B12-binding domain-containing protein 
Protein accessionYP_001097364 
Protein GI134045878 
COG category[R] General function prediction only 
COG ID[COG5012] Predicted cobalamin binding protein 
TIGRFAM ID[TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02370] methyltransferase cognate corrinoid proteins, Methanosarcina family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAT TAAAAGAACG ACTAATAAAA GAACTTTCCG ACTCTATTGT CGAAATGGAC 
GAAGAAAAAA CAGAAGAACT ATCTAAAAAG TATATTGAAA ATGGATTTGA TGCATTTGAA
GGAATTACGG AAGGTCTCGC GGAAGGGATG AATAGGGCAG GAATACTTTA TGAAGAAGGA
GAATACTTCA TTCCTGAACT TTTAGTCTGT TCTGACGCAA TGTACCTTGG TTTAGATATA
TTAAAACCTC ATTTGAAGTA TACTGATTCA GATAGCAAAT TTAAAGCAGT TGTTGGTGTT
GTTGAAGGAG ATACTCACGA TATTGGGAAA AACTTATTTA AAATTATGCT CGAAACACAA
GGCTTTGAAG TTTATGATCT GGGTAGGGAT GTTCCACCTG TCGAATTCAT AAAAAAAGCT
AAAGAAATCA ATGCAGACGT ATTGGGACTT TCAACGCTCA TGACGACTAC AATGGACAAT
ATGAAAGTCG TTATTGACAT GTTGAAAGAA GAAGGAATGC GGGAAAAAAC AATTGTAATG
ATTGGAGGAG GTCCAATCTC ACAAAGTTTC GCAGATAAAA TCGGTGCAGA CGGCTATGCA
CCGGAAGCCT CAAAATCTGC AAGGATTGCA AAAGAATTAG TTACAAAATT AAAAAATTAA
 
Protein sequence
MSELKERLIK ELSDSIVEMD EEKTEELSKK YIENGFDAFE GITEGLAEGM NRAGILYEEG 
EYFIPELLVC SDAMYLGLDI LKPHLKYTDS DSKFKAVVGV VEGDTHDIGK NLFKIMLETQ
GFEVYDLGRD VPPVEFIKKA KEINADVLGL STLMTTTMDN MKVVIDMLKE EGMREKTIVM
IGGGPISQSF ADKIGADGYA PEASKSARIA KELVTKLKN