Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0557 |
Symbol | |
ID | 4928202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 510805 |
End bp | 511611 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640166061 |
Product | SPFH domain-containing protein/band 7 family protein |
Protein accession | YP_001097086 |
Protein GI | 134045600 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTTTT GGCTTAATTT GTTATTTGGT ATATTTATAC TGGTTTTAAT CATAAAATCA GTTATTATTG TAAATCAGTT TGAATTAGGG CTGGTATTTA GACTTGGAAA AGTTAGGGGA AGACTAAATC CGGGAGTTAA CTTCATAATT CCATTTATCG ATGTACCAAT AAAAGTCGAT GTAAGAACCA AGGTAATCGA TGTTCCACCA CAAGAAATGA TTACAAGAGA TAACGCAGGA GTTAGAATCG ATGCGGTTAT ATATTACAGA GTAATGGATG TAAACAGGGC AATTTTAGAG GTTCAAAACT TCCAATACGC AATTATAAAC CTTGCGCAAA CATCCCTTAG AGCAATAATC GGTAGCCTTG AACTCGATGA CGCATTAAAT AAAAGAGAAT ACATCAATTC ACAGCTTTTA GAAACACTCG ATAGAGATAC AGATGCATGG GGTGTAAAAG TTGAAAAAGT TGAATTAAGA GAAATTGAAC CGCCAACTGA CATTAAAAAT GCAATGACCC AACAGATGAA AGCTGAAAGG TTAAAAAGAG CAGCTATCTT AGAAGCAGAA GGGGAAAAAC AGAGCAAAAT CTTGAAAGCT CAAGGTAGTG CAGAAAGTAT GAAAATTGAA GCAGAAGGTC AGGCCAAAGC AATCCAGATC GTTGCAGAAT CTGCGCAAAC TTACTTTAAA AACGAAGCTC AGCTCTATAA GGCTCTTGAT GTAACAACAA ACACCTTAAA AGATAATACC AAGTTTGTAA TTTCCGAGAA TATTATGGAT GTTGCAAAAA AATTCATTAA ACAATAA
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Protein sequence | MSFWLNLLFG IFILVLIIKS VIIVNQFELG LVFRLGKVRG RLNPGVNFII PFIDVPIKVD VRTKVIDVPP QEMITRDNAG VRIDAVIYYR VMDVNRAILE VQNFQYAIIN LAQTSLRAII GSLELDDALN KREYINSQLL ETLDRDTDAW GVKVEKVELR EIEPPTDIKN AMTQQMKAER LKRAAILEAE GEKQSKILKA QGSAESMKIE AEGQAKAIQI VAESAQTYFK NEAQLYKALD VTTNTLKDNT KFVISENIMD VAKKFIKQ
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