Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0537 |
Symbol | |
ID | 4928451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 493287 |
End bp | 494489 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640166041 |
Product | hypothetical protein |
Protein accession | YP_001097066 |
Protein GI | 134045580 |
COG category | [S] Function unknown |
COG ID | [COG1944] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00702] uncharacterized domain [TIGR03266] putative methanogenesis marker protein 1 [TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0125337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGATG ACATTAATTA CACCCTTGCA GCTTACAGAA TCTGCACTCC TGAGGAAACT TTTGAAAAAA TAGAACCGAT AATAAAAGAA ATCGGCGTTA CGAGAACTGC GAGAATTGAT GGGCTCGATA GAATTGGAAT TCCTGTTTTT TCATCGATCA GGCCATCTGC AAAAGATGGT GCAATCAGCG TATACGCTGG AAAAGGCGCT ACTGAAATTC AGGCAAAAGT TTCATCCACA ATGGAAGCAA TTGAACGGTA TTCTGCGGAA TTTGATGAAA ATTCAAAACT TGAACTTTCA AAAGAACCTG AAAACCCCGT AAATTTGGAT GATTTAATTA TTCCCGGTGG AAAAAGTGCA GAACATATTG ATACTGATGG AATTGAATGG GTACTCGGAA AAGATATTAT CAGCGGCAAA ACCTTTGATG TTCCAATAAA CAGTGTTGTT CACCCTCATG ACGGAAAAAA ACTATTTAGA AGTAATACCA ATGGTCTTGC ATCTGGAAAC TCTGAAGAAG AAGCAGTTTT TCACGGAATG CTTGAAGTAA TCGAAAGAGA TGCGTGGAGT ATTTCAGAAC TTTCAAAAAA CACGTACAGA AAATTAAATG TGGAAAACGC GAAAAATCCA CTAATTTTTG AACTCCTTGA AAAATTTAAA AAAGCAAAAA TAAACATAAT ATTAAAAGAT CTAACAAGTG AAGTAGGAAT CCCGACAGTT GCTGCAATTT CCGATGATGA CGTATTGAAA GACCCTGCAC TTTTATGCAT GGGCGTTGGA TGCCATTTAC ATCCAGAAAT TGCTGTTTTA AGGGCATTAA CAGAAGTTGC ACAGAGCAGG GCAACACAAA TCCATGGGGC AAGAGAAGAT ACAAACCGAG GAGATATTGT AAGGAGAATA AGTTACGAAA GGCTAAAAAG AGCGCACAAA AAGTGGTACA CATTTAAAAA TGAAATACAT ATCGAAGATA TGCCCAATAA TGCAAAACTA AATCTTAACA AAGACATTGA AACAGTTAAA GAGACATTGA AACAGCACGG TTTTGATAAA ATCATAACTG TTAAATTAAA TAAAACTGAA ATCGATGTTT CAAGAGTAAT TATTCCAAAA ATGGAAATGT ATAGCGTTGA CAGGGATAGG ATTTCACTCT GGATTAAGGA CAGGATTCGA AGAAACCTAG AAAGTAATTT AAATTTGATT TAA
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Protein sequence | MEDDINYTLA AYRICTPEET FEKIEPIIKE IGVTRTARID GLDRIGIPVF SSIRPSAKDG AISVYAGKGA TEIQAKVSST MEAIERYSAE FDENSKLELS KEPENPVNLD DLIIPGGKSA EHIDTDGIEW VLGKDIISGK TFDVPINSVV HPHDGKKLFR SNTNGLASGN SEEEAVFHGM LEVIERDAWS ISELSKNTYR KLNVENAKNP LIFELLEKFK KAKINIILKD LTSEVGIPTV AAISDDDVLK DPALLCMGVG CHLHPEIAVL RALTEVAQSR ATQIHGARED TNRGDIVRRI SYERLKRAHK KWYTFKNEIH IEDMPNNAKL NLNKDIETVK ETLKQHGFDK IITVKLNKTE IDVSRVIIPK MEMYSVDRDR ISLWIKDRIR RNLESNLNLI
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