Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0500 |
Symbol | |
ID | 4928662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | + |
Start bp | 456780 |
End bp | 458453 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 24% |
IMG OID | 640166003 |
Product | hypothetical protein |
Protein accession | YP_001097029 |
Protein GI | 134045543 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00708219 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGTCAA ACATATTTAA AAAATTTAAT GATTCAAAAT ATGTAATTAT CGATAAAGTT TTTTTTAGAA AACTTGATAA TGAAATTAGA TACACATCCA ATGTAAACGA GTCTTTTGAA ATACTTTTAA ATTACCTTCC ATACGTTAAA AACATAGTTA AAAGCTCCAA AAGACCAAAA TTCGTTAATA AACTGGAATC AAAAGAACTA AATGATCTGA TTTATTATTC GTATATTTAT TATTTGATAC ACTGGGACAA TATTGATTCT TCCAAGCAAA TAGCTTGGCA AAACTGGTTT AATTTTAAAA AAACAGTTGA TAAAAATTTA AAAAATGAAT ATGTTGTAGT TTTAGATTAT ATTAGAAATA TTGATTTTTA TGAAAAATAC ATTTCTAAAA AATTTCCCAA CGAAATTAAA CGATATAATG AAAAAAACAT ATTTTTAAAA TTTTTTGGAA ATTTTCATGG ATTTTTCATG GTTTTTTACT TATTAATGAG GAAATTAACA TGTTTATTCA TAACGGGATT TTCAAAAACG TCTGCAAAGT ATGATAAAAA TATGATATTG GCAATCACGG ATTATGATAG ATATTATGAT AGCAAGGGTT TTTTTAACAG TGAAATATTT TCAAATGCGG AATTTAAAGA ATATTTAAAA TTAAATTTTA ATACGGACGT TGAAACTGAA AATATCCAAG TTGTATATAC AAAATACTCA TTTAAAAATT TTTTAAAATA CCTAATTACT TTTAAAAATG ACAATAAATC CGTATTTTTG GAAGATATTT TGGATTTTCA TATCGGGCTC GAGATTTTTA TTCACGGTTT ATTGAATATT AAAAAAAATA AAAATTTTCC AATCGTTAAA ACCGATGAAA ACATAGAATT TATTGACCAT ATGTACGAAG ATTTCATGAA AAATAAGTTT TTATTTAGTT TATGGTTTTA TTTATCCGTA AAAAAGTACA TTGAAAATAA CAATGTAAAA ATTGTTATTG GTGATTCTGA AAAGAATCTA TTATATTTCT TCTTTAGTAT TTTACGAAAA AATTCAGAAT ATTTTAATAC AATAGCTTTT AGTCACGAAG TAATAATTCC AGATCATTCT TTCTATCTGC CGTTTACTGG ACATTATGAC GATTCACCAG ATTTAAAGTT TGTATGGAAT GAGGGTATAA AGAAATTATT GGTGGATAAA TACAATTATT CTGAAGATAA AATTGCAGTT TTGGATGACC CCCGATTTTT AAAATGGAAA TCAAAGAAAT TCGAAAAAAA ATCGATATTA TTTATATCTC AAGGATATAG TCACTTTTAT GAGGATTTAA TAGATTTTTT CAAAAATGAA ACGGAAAAAG TTAATTTTTT AAAATCAAAA GGTTTTAAAT TTTATTTTAA GCCTCATCCA GCAGAATTTT TAACGCCTAC AAGTAAAAAA TATCTGGAAG AAATAATGAA ATCATATAAT GATATTTCAG TTATAGATAA TCTTGATTTT ATCCCAGAAT ATGGAATAGG GGTAGATTCC ACACTAGTTT ATGAATTAAT GAGGAATGGT ACAAAAGTTT TCTTTTTATC GTTAAATAAT ATATTTATGA TTGAAAAAGA GGATTTTCAA AAATGTTCTA AAAAATCAAT ATCTGATGTA ATACATAGTT TAAAAATAGA GTAA
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Protein sequence | MLSNIFKKFN DSKYVIIDKV FFRKLDNEIR YTSNVNESFE ILLNYLPYVK NIVKSSKRPK FVNKLESKEL NDLIYYSYIY YLIHWDNIDS SKQIAWQNWF NFKKTVDKNL KNEYVVVLDY IRNIDFYEKY ISKKFPNEIK RYNEKNIFLK FFGNFHGFFM VFYLLMRKLT CLFITGFSKT SAKYDKNMIL AITDYDRYYD SKGFFNSEIF SNAEFKEYLK LNFNTDVETE NIQVVYTKYS FKNFLKYLIT FKNDNKSVFL EDILDFHIGL EIFIHGLLNI KKNKNFPIVK TDENIEFIDH MYEDFMKNKF LFSLWFYLSV KKYIENNNVK IVIGDSEKNL LYFFFSILRK NSEYFNTIAF SHEVIIPDHS FYLPFTGHYD DSPDLKFVWN EGIKKLLVDK YNYSEDKIAV LDDPRFLKWK SKKFEKKSIL FISQGYSHFY EDLIDFFKNE TEKVNFLKSK GFKFYFKPHP AEFLTPTSKK YLEEIMKSYN DISVIDNLDF IPEYGIGVDS TLVYELMRNG TKVFFLSLNN IFMIEKEDFQ KCSKKSISDV IHSLKIE
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