| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0485 |
|---|
| Symbol | |
|---|
| ID | 4927707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 440097 |
|---|
| End bp | 440798 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640165988 |
|---|
| Product | phosphate uptake regulator, PhoU |
|---|
| Protein accession | YP_001097014 |
|---|
| Protein GI | 134045528 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0704] Phosphate uptake regulator |
|---|
| TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.89743 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGAA CTGCATTTTC AAACCAAATG AAAGAAGTTG AAGATATGAT TTACGAAATG
TCTGAAATGT GTGCAATTGC TTTGGAAAAT TCAATAACCG CATTTATAAA CAATGACATT
GAACTTGCAA AAGTTATCAA AGCAGGAGAC GATGCTATTG ATCTAAAGGA AATGGAAATT
GAAGAGAAGT GTATCTCATT TATGGCAACA CAGCAACCTG TTGCAAGCGA TTTAAGAGAA
ATGATTACAA TGATTAAAAT CATATCAAAA CTTGAAAAAG TTGGAGATAT GGCATCAAGA
ATTGCAAAAA TAACCATAAA GTCTGAACAC GACACATTGA GATCAAAAAA TGGAAGCATG
TTAACAATCA TGGGCGAAAT TCTTGATAAA ATGCTTAAAA ATTCGATTTC ATCATTCAGA
AATAGGGATT TAACTGTTGC AAAAGAAACT TACCTTGAAG ATGGTAAAAT AGATGAACTC
TACAAAGTAC TCTGCAGAGA CATGACAATA AACATGATTG AGAACCCAAA AGTAATCAGT
GAAGCTGGTG ACTTTATCGT TGTTGGAACA TACCTTGAAA GAGTCGGAAA TTTGTGTGGA
AGTATCGGAG ATAGAGTTGC ATTCATGATT ACCGGAGAAA GATTAAAAGA AGAAGAATTT
GAGAAAATAT TGAAAAAAAC TACAAAAAAG TTGGAAAATT AA
|
|---|
| Protein sequence | MARTAFSNQM KEVEDMIYEM SEMCAIALEN SITAFINNDI ELAKVIKAGD DAIDLKEMEI
EEKCISFMAT QQPVASDLRE MITMIKIISK LEKVGDMASR IAKITIKSEH DTLRSKNGSM
LTIMGEILDK MLKNSISSFR NRDLTVAKET YLEDGKIDEL YKVLCRDMTI NMIENPKVIS
EAGDFIVVGT YLERVGNLCG SIGDRVAFMI TGERLKEEEF EKILKKTTKK LEN
|
|---|
| |