Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0365 |
Symbol | |
ID | 4928255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | + |
Start bp | 323383 |
End bp | 324543 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640165870 |
Product | geranylgeranyl reductase |
Protein accession | YP_001096896 |
Protein GI | 134045410 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.230405 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTTG AAAAGTACGA CGTTGTAATT GTTGGTGGCG GACCTTGTGG ATTTATCACT GGAGAGAATA TTAAAAATAA GAAAGTGCTT GTTTTAGAAG AACATCAAGA AATCGGGGTT CCATTGCAGT GTGCAGGACT TTTAAGTAAA AAATGTATAA ATGAACTTGG AAATCCAAAA GGTTCAGTAA ATAAAATTGG GGGGGCGCAT ATTTATTCGA GAAACAGTTC TGTTACAGTT GGAAATGAAG AAATCCGGGC AGAAGTGTTT GAAAGAAAGG TAATGGATAA GGATATTGCA ACAAGGGCTT CTAAAAATGT GGATGTATTG TTAAAATCAT ACGGAAAAAT TAAAAGTTCA AACAATTCTT CTACAATTTG GGATAAGACT AAGCATAAAT TACAGATAAT GCACATGGAT GAAACATTCG AAGTTTCTCC TGAGGTAATT ATTGGGGCTG ATGGAATACG GTCAACAATT GGTAGATCAT TGAATATGCT AGATAAAAAG CGAGAAATAA TTTCTGGAGT TCAGATCGAG TTTGTTAATG CAGAAATTGA TGACGATTTC GTTAATGTAT TTTATGATAA AAGGTATTCT GAAAAGTTTT TCACATGGAT AATTCCACTT GGAAACGATA GGGTAAGGGT TGGAATGTGT GATTCGAATA ATTCTTACAA AAAATTAATG GATTTTTTAG AAACTAATAA AATTGCAAAA GAAATTTTGA AAAATGCAAC CCCTGTTGAA TTTATTTGCG GTGCAATTCC AATTGGATAT TCAAAAACAG TTAAAGACAA TATAATGCTT GTTGGAGATT CTGCTGGCCA GGTAAAACCT TTAAGTGGCG GTGGGCTTTA TTATGGTGCA AAATGCGGAA AAATCTGTGC AGATACAATA AACCAGTATT TTGAAGGAAA TTGTGACATT GATTTTTTGA AAAACTATGA AAAAAACTGG AAAAGCGAAA TCGCTTCTGA AATTGATAAG AATATTAAAA TTAGAAAAAT TTTAAACATG TTAAATAATG ATAAAATGGA TCGAATTTTT GATTTTATCA ATAAAAACAA CCTTGTAGAT TTTATAAATG AAAATGGGGA TATGGATAAT CCTTCAACAG TTGTCAGGCC AATTTTAGAT AGAGTTCTCT TTGGAAAATA G
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Protein sequence | MDFEKYDVVI VGGGPCGFIT GENIKNKKVL VLEEHQEIGV PLQCAGLLSK KCINELGNPK GSVNKIGGAH IYSRNSSVTV GNEEIRAEVF ERKVMDKDIA TRASKNVDVL LKSYGKIKSS NNSSTIWDKT KHKLQIMHMD ETFEVSPEVI IGADGIRSTI GRSLNMLDKK REIISGVQIE FVNAEIDDDF VNVFYDKRYS EKFFTWIIPL GNDRVRVGMC DSNNSYKKLM DFLETNKIAK EILKNATPVE FICGAIPIGY SKTVKDNIML VGDSAGQVKP LSGGGLYYGA KCGKICADTI NQYFEGNCDI DFLKNYEKNW KSEIASEIDK NIKIRKILNM LNNDKMDRIF DFINKNNLVD FINENGDMDN PSTVVRPILD RVLFGK
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