| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0315 |
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| Symbol | sdhA |
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| ID | 4927859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 276964 |
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| End bp | 278583 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640165820 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001096846 |
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| Protein GI | 134045360 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAACAG ATGTGCTCAT AATTGGCGGT GGCGGTGCTG CAGCAAGGGC AGCAATAGAA
TGCGGGCAGA AAAATGTGGT AATCGCTTCA AAAGGCCTTT TCGGAAAAAG CGGATGTACA
GTAATGGCTG AAGGCGGGTA CAATGCAGTA CTAAATCCAG AAGATTCATT TGAAAAACAC
TATTCCGACA CGATGAAGGG TGGAGGATAC ATAAACAATA AAAAACTCGT AGAAGTTTTG
ATAAAAAATG CACCAAAAGA ATTTAAGAAC TTGGAAAAAT TTGGATGTAT TTTTGATAGG
TCAGAAAATG CAGAGTTTGC ACAGAGGCCG TTTGGTGGAC AGAGCTTTAA TCGAACGTGT
TATAGCGGAG ACAGTACTGG CCATGAAATG ATTGCAGGAT TAATGGAGTA TCTGAATAAA
TTTGAGCGCA TAAAAATATT GGAAGATACA ATGGCAATAA AATTAATTGT CAATGAAGTT
TTTGAAAACG AAAAAAAACT CAAAAAATGT TTTGGGGCAG TATTTTTAGA TTTATTAAAT
GGCGATATTT ATCCGATATA TGCAAAATCT ACGATTCTTG CGACAGGGGG TGCAGGACAG
ATTTATCCTA TAACTTCAAA TCCGAAACAA AAGGTAGGGG ATGGATTCGC AATTGCTTAT
CGTGAAGGTG CTGAATTAAT TGACATGGAA ATGGTTCAGT TTCACCCAAC AGGAATGCTT
GGAACAGGAA TTCTTGTAAC TGAAGCTGTA AGGGGCGAAG GTGGGATATT ATACAATAAA
AATAAAGAAA GATTCATGAA AAACTACGAT CCCGAAAGAA TGGAGTTATC AACAAGAGAT
GTAGTTGCTA AGGCAATATA CAATGAGATT CAAGAAGGTA GGGGTATTGA TGGTGCGGTT
TACCTGGATG TAACTCATTT GGACCCTGAA ATTATTAAAG AAAAGCTCGA AACTATGCTT
TCACAGTTCA TGCTTGTGGG TGTAGACATT AAAAAAGAGC CAATGAAAGT AGCTCCAACG
GCACACCACT TCATGGGCGG AATTAAAATA AACGAAAATT GTGAAACAAG TATTTCTGGA
TTGTATGCCT GCGGAGAAGT TGCAGGTGGA ATCCATGGTG CAAACAGGCT TGGTGGAAAT
GCCCTTGCAG ATACGCAAGT TTTTGGAGCA ATTGCTGGAA AAAATGCATT TGATAATGCT
GAAAATGAGA TTGATATCTC AAAAGTATAT AATTCAGTTG AAAAATGCAT TGAAGACTTG
AAAAATGCAT TTAATGATTC AAATTCTGGC GATAACGTAT ATTCATTAAT TGATGAATTA
AAAAAGACAA TGTGGGATTT TGTTTCAATT TTAAGAGACG AAAAAGGATT AACCTCAGCT
CTTGAAAAAA TAGTTGAAAT AAAGGAAAAA TCAGTTTCAA TAAATGGAAT AGTGGACTTT
TCAAAAAAAT TAGAACTAGA AAACATGATT TTAGTTTCTG AAATTGTAAT AAATTCAGCC
CTCCTTAGAA AAGAGTCAAG AGGGGCACAT TTTAGAAACG ATTATCCAAA AATCAATGAA
GAATGCATTG GAAACTTTGT GGCAAGTTTG GATGGAATTA GTTTTGTAAA ACTTGAATAA
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| Protein sequence | MITDVLIIGG GGAAARAAIE CGQKNVVIAS KGLFGKSGCT VMAEGGYNAV LNPEDSFEKH
YSDTMKGGGY INNKKLVEVL IKNAPKEFKN LEKFGCIFDR SENAEFAQRP FGGQSFNRTC
YSGDSTGHEM IAGLMEYLNK FERIKILEDT MAIKLIVNEV FENEKKLKKC FGAVFLDLLN
GDIYPIYAKS TILATGGAGQ IYPITSNPKQ KVGDGFAIAY REGAELIDME MVQFHPTGML
GTGILVTEAV RGEGGILYNK NKERFMKNYD PERMELSTRD VVAKAIYNEI QEGRGIDGAV
YLDVTHLDPE IIKEKLETML SQFMLVGVDI KKEPMKVAPT AHHFMGGIKI NENCETSISG
LYACGEVAGG IHGANRLGGN ALADTQVFGA IAGKNAFDNA ENEIDISKVY NSVEKCIEDL
KNAFNDSNSG DNVYSLIDEL KKTMWDFVSI LRDEKGLTSA LEKIVEIKEK SVSINGIVDF
SKKLELENMI LVSEIVINSA LLRKESRGAH FRNDYPKINE ECIGNFVASL DGISFVKLE
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