| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0300 |
|---|
| Symbol | |
|---|
| ID | 4927590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 261854 |
|---|
| End bp | 263050 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640165802 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_001096831 |
|---|
| Protein GI | 134045345 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.122036 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGTGT CCATCGTTAC TTGGGAATAC CATCCGATAA TGGTTGGTGG ATTAGCAGTA
CATTGTAAGG GGTTATCTGA AGCGCTTGTG AGGGCAGGCA ACGAAGTTGA CGTGATAACG
GTAGGTTACG ACCTTCCGGA GTATGAAGAG ATAAATGGGG TAAATGTTTA CCGTGTAAAA
CCGATTTCAC ACAATAATTT TTTAACGTGG GCAATGTTCA TGGCAAATTC GCTTGAAAAA
AAGATAGGTA GTTTGGGTGT TGAAAATTAC GATGTTATAC ACTGCCACGA TTGGATGACA
TCATTTGTAG GTTCAAATTT AAAACACACC GCAAAAAAAC CGTACGTTCA ATCAGTTCAC
AGTACTGAAC GAGGGAGGTG TGGCGGAATT AATTCTGAAG ATTCAAGGGC AATAAATGAT
GCAGAATGGT GGGGAAGCTA TGAATCAAAC CAGCTTATCG CAGTAAGTCA TTCTACGAAA
GATGAAATGT GTTATGGATT TAATACGCCT TGGGAAAAGG TAAATGTTAT TTATAATGGG
GTTAATCCTT GGGAATTTGA TATCGATGGA AATGATGACG AAAAATATAA TTTTAGACGA
AGTTTTGGGG TAGCTGATCA CGAAAACATG ATTCTTTTTG TTGGAAGGCT CGCATATCAG
AAGGGGGTTG AGCATTTAAT AAGGGGATTT CAAAAATTTT TAATTGGGCA CCCCAATTCA
AAACTGGTAG TTGCAGGAGA AGGGCACATG CAGGGGCATT TGGAACATGT GGCTTGGACG
TTAGGCTGCA GGGACAGAGT TATTTTTTTA GGATTTAAAA ATGGAAATTT TTTAAAAAAA
TTATACAAAT ATGCAGATGC ATGTGTTATT CCTTCAGTAT ACGAACCATT TGGAATCGTG
GCTCTTGAAG CAATGGCTGC AGGAACTCCT GTAGTTGCAA GCGATGTTGG TGGATTGAGT
GAAATTATAA ATCACGAATA CAATGGAGTT AAAGTCTACC CTCGAGATGC AGATTCTATT
GCATGGGGTC TTGATAGGGT AATTTCGGAT TGGGGATTTA GAGAATGGAT TACTAAAAAT
GCAAAGCACG ATGCATACAC GAAATACAGC TGGGACGCAA TCGCAAATCA AACGGTTCAG
GTATATAAAC GTGCAATTGA AATGATGAAG CAATATATTA TTATAAAGCT TGATTAA
|
|---|
| Protein sequence | MRVSIVTWEY HPIMVGGLAV HCKGLSEALV RAGNEVDVIT VGYDLPEYEE INGVNVYRVK
PISHNNFLTW AMFMANSLEK KIGSLGVENY DVIHCHDWMT SFVGSNLKHT AKKPYVQSVH
STERGRCGGI NSEDSRAIND AEWWGSYESN QLIAVSHSTK DEMCYGFNTP WEKVNVIYNG
VNPWEFDIDG NDDEKYNFRR SFGVADHENM ILFVGRLAYQ KGVEHLIRGF QKFLIGHPNS
KLVVAGEGHM QGHLEHVAWT LGCRDRVIFL GFKNGNFLKK LYKYADACVI PSVYEPFGIV
ALEAMAAGTP VVASDVGGLS EIINHEYNGV KVYPRDADSI AWGLDRVISD WGFREWITKN
AKHDAYTKYS WDAIANQTVQ VYKRAIEMMK QYIIIKLD
|
|---|
| |