| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0159 |
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| Symbol | rps5p |
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| ID | 4928091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | - |
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| Start bp | 136245 |
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| End bp | 136934 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640165659 |
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| Product | 30S ribosomal protein S5P |
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| Protein accession | YP_001096691 |
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| Protein GI | 134045205 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01020] ribosomal protein S5(archaeal type)/S2(eukaryote cytosolic type) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0020988 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGAAA AAAAGGCTGA CAAAAGAGCT GAAAAAAGAA AATTCAATAC CGAAGCTTGG
GAACCAAAAA CTCAAATCGG TAGAATGGTT AAGGAAGGAA CAATTTCAGA CATCAGTTAC
ATTATGGATA AAGGTCTTCC ATTATTAGAA CCTGAAATTG TTGATGCACT CTTACCTGAT
TTAGAAGAGC AAGTTTTGGA CGTTAAATTA GTTCAAAGAA TGCACAAATC TGGAAGAAGA
GCAAGATACA GAGCAACTGT TGCTGTAGGT AACAAAAATG GTTACGTTGG CGTAGGCATG
GGTAAATCAA AAGAAGTTGG CCCTGCTATC AGAAAAGCAA TTGCTCACGC AAAATTATCA
TTAATCAAAG TTAGAGTTGG CTGCGGTTCA TGGGAATGCG GTTGCGGATC CCCTCACTCA
ATTCCATTCG CAGCTAAAGG GGCTTGCGGT AGCGTTAAAG TCGAATTACT CCCTGCACCA
AGAGGTGTTG GTTTAGTTGC GGGTAACGTT GCAAAAGCTG TTTTAGGTCT TGCAGGTGTG
AAAGATGCAT GGACTAAAAC CTTTGGTGAC ACAAGAACCA CATTCAACTT TGCTGAAGCT
ACATTCGATG CATTAAACAA CTTAAACTTC GTAAGATGCT TGCCTAACCA AAAGGAAAAA
TTAGGTCTTA CTGAAGGAAG AGTACTCTAA
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| Protein sequence | MAEKKADKRA EKRKFNTEAW EPKTQIGRMV KEGTISDISY IMDKGLPLLE PEIVDALLPD
LEEQVLDVKL VQRMHKSGRR ARYRATVAVG NKNGYVGVGM GKSKEVGPAI RKAIAHAKLS
LIKVRVGCGS WECGCGSPHS IPFAAKGACG SVKVELLPAP RGVGLVAGNV AKAVLGLAGV
KDAWTKTFGD TRTTFNFAEA TFDALNNLNF VRCLPNQKEK LGLTEGRVL
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