Gene MmarC5_0131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_0131 
Symbol 
ID4927727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand- 
Start bp110158 
End bp110814 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content34% 
IMG OID640165631 
ProductXRE family transcriptional regulator 
Protein accessionYP_001096663 
Protein GI134045177 
COG category[K] Transcription 
COG ID[COG3620] Predicted transcriptional regulator with C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.169212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTAAAA GTGGTAAAAT GTACGACAAA TTAAAAATCA TAGAAAGGGC AATTCTGCTC 
AATCCCGAAA ATATAAAAGT TTTTCGTGAA AAGCTCAAGA TAACCCAGTC CAAACTTGCT 
GAAGAAAGTG GGGTTAGTCA GTCCCATTTG AGTATGCTTG AAAAAGGAAA ACGGGAAATT 
GGGGAAGCAC ATGCTGCCGC AATAACGCTT GGGATGCTTA AATGTAGTAA TTTTTGGGAT 
AAAGAGAATC CTGTTTTATA TTTATTAGAC GTACTTTCAT TGACAAAACT TGAAGGTGCT 
ATTGTCGATT TTATCCAGGA TTTAACGTCA AAAAACGATA TCTTCTGTAA AAGATATATT 
GAAGGACATC CTGTGTATAT TATAGATATA AAATATTTTA CTGGAGAAAT CAAAAAACGA 
CTTGGTGTCG TAGATATCAA TGAAGTTGAT TTTTTCAGGG GCAGAATGAA TATTAGAGGA 
TTGCACCTTG ATAAAAAAAC CGTACTAATC CAGTTAGACT GCTCAGACAT TCGAAGGCTT 
GAACATAAGG TATCTAACGT ATTGAATAAC AAGACAATAA TTCAAATATT CCCAAAAGAG 
GAAGTTCCCC CAATATATTC AATAAAAAAA GACTGCATGA TTGTACACTG CTGGTGA
 
Protein sequence
MSKSGKMYDK LKIIERAILL NPENIKVFRE KLKITQSKLA EESGVSQSHL SMLEKGKREI 
GEAHAAAITL GMLKCSNFWD KENPVLYLLD VLSLTKLEGA IVDFIQDLTS KNDIFCKRYI 
EGHPVYIIDI KYFTGEIKKR LGVVDINEVD FFRGRMNIRG LHLDKKTVLI QLDCSDIRRL 
EHKVSNVLNN KTIIQIFPKE EVPPIYSIKK DCMIVHCW