| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0097 |
|---|
| Symbol | |
|---|
| ID | 4929143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 85321 |
|---|
| End bp | 85998 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640165596 |
|---|
| Product | cobalt transport protein CbiM |
|---|
| Protein accession | YP_001096629 |
|---|
| Protein GI | 134045143 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCACATTA TGGAAGGTTT TCTACCTCCG ATGTGGGCTG CATTCTGGTT TGTGCTATCT
GGCATCATCG TTATATACGG AATAATCCAA TTAAATAAAT TAATTAACGA CAAACCTGAA
GTTAAACCCA CATTAGCCCT CGCAGGAGCG TTCATGTTTA TATTAAGTTC GCTAAAACTT
CCTTCAGTAA CGGGAAGCTG TTCACACCCG ACAGGTGGTG GACTTGGCGC AGTTATGTTT
GGTCCAGCAA TTACAGCAGT ACTTGCGACA ATTGTATTAT TGTTCCAGGC AATCTTACTT
GCACACGGTG GATTAACCAC ATTGGGAGCA AATATATTCT CAATGGGTAT CATGGGACCA
GCAATTGGTT TTTTAGTGTT TAAATTGTTA AAAGGAAAAT TAAATATCAC ATGGGTTGTT
GTACTCGCTG CAATATTTGC AGACTGGGGA ACATACGCTA CAACATCAAT CCAGCTCGCT
TTAGCATACC CATTACCAGA TTTTGGAACA GCGCTTTCAA ACTTTGGAAC CGTATTTGCA
GTGACACAGA TTCCACTTGC AATTATGGAA GGTCTTTTAA CAGGACTTAT CTGGGATTAC
ATCATGAAAT TAAGACCAGA TCTCCTTGCA AAACTTGGTC TTATTGACCC TGCAAAAGCT
GAAGGGGGTG CTGAATAA
|
|---|
| Protein sequence | MHIMEGFLPP MWAAFWFVLS GIIVIYGIIQ LNKLINDKPE VKPTLALAGA FMFILSSLKL
PSVTGSCSHP TGGGLGAVMF GPAITAVLAT IVLLFQAILL AHGGLTTLGA NIFSMGIMGP
AIGFLVFKLL KGKLNITWVV VLAAIFADWG TYATTSIQLA LAYPLPDFGT ALSNFGTVFA
VTQIPLAIME GLLTGLIWDY IMKLRPDLLA KLGLIDPAKA EGGAE
|
|---|
| |