Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0014 |
Symbol | |
ID | 4928231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 8579 |
End bp | 9367 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640165509 |
Product | tetrahydromethanopterin S-methyltransferase subunit C |
Protein accession | YP_001096546 |
Protein GI | 134045060 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4061] Tetrahydromethanopterin S-methyltransferase, subunit C |
TIGRFAM ID | [TIGR01148] N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit C |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.316661 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACATG GTGGCGGAGG ACACGCAGCA GAACTATTCC CTGAAGATCA GGTTTTAGCA TTCGGCGCTG TATTATCACT CGTTGGAATA TACATCGCAC ACTTTTTCCC GTCATTAGCT ATGCTCCTTG GTGGGTTATT AGCTGCGGGC GCTTGTGTTG CAGGTGCTAA CACTACAAGA AGAGTAGCCG CATACGGTTT AGGTACAGGT GTTCCATCAA TTGGAATGGT AAGTTTAGGT ATGGGTACAA TTTCCGCATT AGCAGGTGTT TTGATACCTT CAGCATTTGG ACTCCCAGTA CTTGTTACAC CAATCCTTGC TGCAGTAATC GCAGTAGTTG TTGGATTCAT CGTGGGTAAG TTAACACAAA ACCCAGTAGG AATGAAAGTA CCAATTATTG TTTCAAGTAT GACTAAACTC TCATTAATGG GTGCTTTAGC AATTTTAGGA TTCTGTACTG CATTCGCAGG CGGATTTTCA GCAGATATAA TTATTAACGG TGCAATTAAC AACGGAGTTA TTGCATTGGC ATTTATTGCA GCAGGTATGG CAATTTTGCA CCCATTCAAC GCATGTATCG GTCCAGATGA GAGCCACAAG AGAACAATGA CTCTTGCAGT TGCATGTGGA TTTATGGCAT GGTTGGTATT CGCAATTGCA AAATTAGACA TAGTTTCAAC AGCAGTAGCT GCAATCTTCT GGTTCATCGC TTACGGAACA TTCGTAAAAA CATCACTTGC TGATGCTTGC GAAGTTAAAT ATGTACCAGA ATTGCCTAAG AAAGAGTAA
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Protein sequence | MSHGGGGHAA ELFPEDQVLA FGAVLSLVGI YIAHFFPSLA MLLGGLLAAG ACVAGANTTR RVAAYGLGTG VPSIGMVSLG MGTISALAGV LIPSAFGLPV LVTPILAAVI AVVVGFIVGK LTQNPVGMKV PIIVSSMTKL SLMGALAILG FCTAFAGGFS ADIIINGAIN NGVIALAFIA AGMAILHPFN ACIGPDESHK RTMTLAVACG FMAWLVFAIA KLDIVSTAVA AIFWFIAYGT FVKTSLADAC EVKYVPELPK KE
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